Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1147 | Not Available | Positive | 1254971 - 1255771 | 30027.9 |
| patatin-like phospholipase family protein | M099_1148 | Not Available | Negative | 1255911 - 1256765 | 32936.4 |
| hypothetical protein | M099_1149 | Not Available | Negative | 1256768 - 1256884 | 4633.68 |
| aminopeptidase p, n-terminal domain protein | M099_1150 | Not Available | Positive | 1257095 - 1258486 | 51737.2 |
| papain cysteine protease family protein | M099_1151 | Not Available | Positive | 1258515 - 1259726 | 45970.4 |
| single-stranded-dna-specific exonuclease recj | M099_1152 | Not Available | Positive | 1259892 - 1261613 | 64410.8 |
| atp-dependent dna helicase, recq family protein | M099_1153 | Not Available | Positive | 1261731 - 1263626 | 72880.8 |
| o-glcnacase | M099_1154 | Not Available | Positive | 1263673 - 1265886 | 85039.3 |
| tetratricopeptide repeat family protein | M099_1155 | Not Available | Positive | 1265901 - 1266851 | 35751.7 |
| hypothetical protein | M099_1156 | Not Available | Positive | 1266911 - 1267912 | 36967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

