Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1137 | Not Available | Positive | 1249559 - 1250185 | 24334.1 |
| putative g/u mismatch-specific dna glycosylase | M099_1138 | Not Available | Positive | 1250200 - 1250793 | 23002.2 |
| Trna-trp | Not Available | Not Available | Positive | 1250861 - 1250936 | Not Available |
| radical sam superfamily protein | M099_1140 | Not Available | Negative | 1250993 - 1251400 | 15203.2 |
| 6-pyruvoyl tetrahydropterin synthase family protein | M099_1141 | Not Available | Negative | 1251525 - 1251836 | 11943.1 |
| hypothetical protein | M099_1142 | Not Available | Negative | 1251907 - 1252041 | 5115.55 |
| hypothetical protein | M099_1143 | Not Available | Positive | 1251992 - 1252354 | 14082.9 |
| hypothetical protein | M099_1144 | Not Available | Positive | 1252584 - 1252820 | 9418.35 |
| cell division zapa family protein | M099_1145 | Not Available | Positive | 1252901 - 1253143 | 9655.37 |
| ribonuclease y | M099_1146 | Not Available | Positive | 1253304 - 1254779 | 55317.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

