Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | M099_1127 | Not Available | Positive | 1235896 - 1236861 | 37388.1 |
| Trna-ser | Not Available | Not Available | Positive | 1237162 - 1237246 | Not Available |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_1129 | Not Available | Positive | 1237379 - 1239130 | 68500.7 |
| cytochrome c biogenesis transmembrane region family protein | M099_1130 | Not Available | Positive | 1239263 - 1241296 | 74735.8 |
| serine dehydratase alpha chain family protein | M099_1131 | Not Available | Positive | 1241488 - 1242783 | 46076.9 |
| putative acetyltransferase | M099_1132 | Not Available | Negative | 1242858 - 1243136 | 10514.7 |
| his kinase a domain protein | M099_1133 | Not Available | Negative | 1243286 - 1247173 | 146652.0 |
| divergent aaa domain protein | M099_1134 | Not Available | Positive | 1247378 - 1248019 | 24582.8 |
| amino acid carrier family protein | M099_1135 | Not Available | Positive | 1248025 - 1249425 | 51010.3 |
| hypothetical protein | M099_1136 | Not Available | Negative | 1249447 - 1249566 | 4587.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

