Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | M099_1117 | Not Available | Negative | 1219760 - 1220359 | 22102.6 |
| putative membrane protein | M099_1118 | Not Available | Negative | 1220374 - 1221063 | 25224.2 |
| cobn/magnesium chelatase family protein | M099_1119 | Not Available | Negative | 1221070 - 1225545 | 166081.0 |
| tonb dependent receptor family protein | M099_1120 | Not Available | Negative | 1225592 - 1227703 | 79471.4 |
| hmuy family protein | M099_1121 | Not Available | Negative | 1227762 - 1228424 | 24838.4 |
| lipocalin-like domain protein | M099_1122 | Not Available | Negative | 1228426 - 1228893 | 16027.4 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_1123 | Not Available | Positive | 1229892 - 1230614 | 28138.0 |
| hypothetical protein | M099_1124 | Not Available | Positive | 1231135 - 1233906 | 103693.0 |
| ompa family protein | M099_1125 | Not Available | Positive | 1233911 - 1235101 | 45011.6 |
| hypothetical protein | M099_1126 | Not Available | Positive | 1235536 - 1235661 | 4901.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

