Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase family protein | M099_1107 | Not Available | Negative | 1204946 - 1206199 | 44034.9 |
| fecr family protein | M099_1108 | Not Available | Positive | 1206423 - 1207349 | 35749.9 |
| tonb-linked outer membrane, susc/raga family protein | M099_1109 | Not Available | Positive | 1207570 - 1210917 | 122773.0 |
| susd and ragb outer membrane lipofamily protein | M099_1110 | Not Available | Positive | 1210936 - 1212549 | 60238.9 |
| dicarboxylate symporter family protein | M099_1111 | Not Available | Positive | 1212785 - 1213966 | 42249.4 |
| hypothetical protein | M099_1112 | Not Available | Positive | 1214076 - 1215566 | 55815.4 |
| hypothetical protein | M099_1113 | Not Available | Positive | 1215578 - 1216138 | 21343.8 |
| ahpc/tsa family protein | M099_1114 | Not Available | Negative | 1216238 - 1217233 | 37161.8 |
| hypothetical protein | M099_1115 | Not Available | Positive | 1217415 - 1219115 | 64676.0 |
| hypothetical protein | M099_1116 | Not Available | Negative | 1219429 - 1219758 | 12445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

