Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate binding enzyme family protein | M099_1077 | Not Available | Negative | 1159436 - 1160419 | 37481.9 |
| hypothetical protein | M099_1078 | Not Available | Positive | 1160561 - 1160713 | 5857.31 |
| hypothetical protein | M099_1079 | Not Available | Negative | 1160761 - 1162794 | 77627.4 |
| glycosyl hydrolases 43 family protein | M099_1080 | Not Available | Negative | 1162814 - 1163815 | 37472.1 |
| glycosyl hydrolases 43 family protein | M099_1081 | Not Available | Negative | 1163812 - 1164768 | 36526.4 |
| glycosyl hydrolases 43 family protein | M099_1082 | Not Available | Negative | 1164788 - 1167421 | 101166.0 |
| starch-binding associating with outer membrane family protein | M099_1083 | Not Available | Negative | 1167501 - 1169090 | 61771.0 |
| tonb-linked outer membrane, susc/raga family protein | M099_1084 | Not Available | Negative | 1169112 - 1172111 | 112088.0 |
| his kinase a domain protein | M099_1085 | Not Available | Negative | 1172427 - 1176377 | 152137.0 |
| aldose 1-epimerase family protein | M099_1086 | Not Available | Negative | 1176560 - 1177693 | 42509.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

