Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h+ symporter permease | M099_0084 | Not Available | Negative | 89211 - 90524 | 48451.5 |
| l-fucose isomerase | M099_0085 | Not Available | Negative | 90635 - 92410 | 65624.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 93069 - 93176 | Not Available |
| bacterial regulatory s, gntr family protein | M099_0086 | Not Available | Negative | 92432 - 93412 | 38041.7 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | M099_0087 | Not Available | Positive | 93882 - 95375 | 55080.0 |
| hypothetical protein | M099_0088 | Not Available | Positive | 95478 - 96059 | 22097.6 |
| phosphate-selective porin o and p family protein | M099_0089 | Not Available | Positive | 96141 - 97313 | 43731.8 |
| hypothetical protein | M099_0090 | Not Available | Positive | 97405 - 97563 | 6058.39 |
| subtilase family protein | M099_0091 | Not Available | Positive | 97581 - 99437 | 67259.1 |
| hypothetical protein | M099_0092 | Not Available | Positive | 99460 - 100440 | 35247.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

