Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidinotransferase family protein | M099_1067 | Not Available | Negative | 1149879 - 1150790 | 34265.9 |
| amidinotransferase family protein | M099_1068 | Not Available | Negative | 1150813 - 1151733 | 35512.7 |
| endonuclease iii | M099_1069 | Not Available | Positive | 1151851 - 1152495 | 24147.7 |
| metallo-beta-lactamase superfamily protein | M099_1070 | Not Available | Negative | 1152490 - 1153266 | 29075.3 |
| udp-n-acetylenolpyruvoylglucosamine reductase | M099_1071 | Not Available | Negative | 1153275 - 1154288 | 37609.1 |
| hypothetical protein | M099_1072 | Not Available | Negative | 1154300 - 1155127 | 32267.9 |
| phenylalanine--trna ligase, alpha subunit | M099_1073 | Not Available | Positive | 1155272 - 1156306 | 38981.6 |
| major facilitator superfamily protein | M099_1074 | Not Available | Positive | 1156434 - 1157630 | 43918.7 |
| hypothetical protein | M099_1075 | Not Available | Negative | 1157627 - 1158769 | 43009.4 |
| aminotransferase class iv family protein | M099_1076 | Not Available | Negative | 1158859 - 1159452 | 22723.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

