Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative immunoreactive antigen | M099_1057 | Not Available | Negative | 1141424 - 1142872 | 55102.5 |
| hypothetical protein | M099_1058 | Not Available | Negative | 1142911 - 1143507 | 22713.4 |
| hypothetical protein | M099_1059 | Not Available | Positive | 1144142 - 1144465 | 12637.6 |
| hypothetical protein | M099_1060 | Not Available | Positive | 1144548 - 1145321 | 29971.7 |
| hypothetical protein | M099_1061 | Not Available | Positive | 1145329 - 1145781 | 16728.3 |
| Trna-ser | Not Available | Not Available | Positive | 1146010 - 1146100 | Not Available |
| 7-cyano-7-deazaguanine reductase | M099_1063 | Not Available | Negative | 1146188 - 1146643 | 17765.2 |
| queuosine biosynthesis protein quec | M099_1064 | Not Available | Negative | 1146865 - 1147533 | 24735.8 |
| conserved hypothetical integral membrane family protein | M099_1065 | Not Available | Negative | 1147654 - 1148340 | 25083.7 |
| ornithine--oxo-acid transaminase | M099_1066 | Not Available | Negative | 1148629 - 1149864 | 45621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

