Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_1047 | Not Available | Positive | 1129496 - 1129900 | 15021.9 |
| putative transposase | M099_1048 | Not Available | Positive | 1129888 - 1130046 | 6074.45 |
| hypothetical protein | M099_1049 | Not Available | Negative | 1130259 - 1130402 | 5586.14 |
| outer membrane beta-barrel domain protein | M099_1050 | Not Available | Negative | 1130490 - 1131626 | 41757.1 |
| bacterial rna polymerase, alpha chain c terminal domain protein | M099_1051 | Not Available | Negative | 1131769 - 1132428 | 25588.4 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_1052 | Not Available | Negative | 1132464 - 1133312 | 32984.3 |
| hypothetical protein | M099_1053 | Not Available | Negative | 1133712 - 1137050 | 123442.0 |
| hypothetical protein | M099_1054 | Not Available | Negative | 1137351 - 1138604 | 46212.1 |
| fimbrillin-a associated anchor s mfa1 and mfa2 family protein | M099_1055 | Not Available | Negative | 1138686 - 1139618 | 35051.4 |
| hypothetical protein | M099_1056 | Not Available | Negative | 1139799 - 1141328 | 55426.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

