Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase, multifunctional complex type domain protein | M099_1037 | Not Available | Positive | 1117155 - 1118495 | 49620.5 |
| vitamin b12 dependent methionine synthase, activation domain protein | M099_1038 | Not Available | Positive | 1118492 - 1119379 | 33419.9 |
| calcineurin-like phosphoesterase family protein | M099_1039 | Not Available | Positive | 1119394 - 1120554 | 43681.4 |
| 1-acylglycerol-3-phosphate o-acyltransferases domain protein | M099_1040 | Not Available | Positive | 1120594 - 1121352 | 28645.4 |
| hypothetical protein | M099_1041 | Not Available | Negative | 1121366 - 1122043 | 25343.6 |
| peptidase s7, flavivirus ns3 serine protease family protein | M099_1042 | Not Available | Positive | 1122258 - 1124423 | 81216.0 |
| peptidase s46 family protein | M099_1043 | Not Available | Positive | 1124423 - 1126609 | 82680.6 |
| hypothetical protein | M099_1044 | Not Available | Negative | 1126727 - 1127044 | 12033.2 |
| septum formation initiator family protein | M099_1045 | Not Available | Negative | 1127068 - 1127364 | 11882.5 |
| dna polymerase iii, subunit gamma and tau | M099_1046 | Not Available | Positive | 1127483 - 1129294 | 67555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

