Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal l11 methyltransferase family protein | M099_1007 | Not Available | Positive | 1079295 - 1080140 | 31686.8 |
| hypothetical protein | M099_1008 | Not Available | Negative | 1080362 - 1080676 | 11206.5 |
| glycosyl hydrolases 25 family protein | M099_1009 | Not Available | Negative | 1080776 - 1081534 | 29772.6 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | M099_1010 | Not Available | Negative | 1081768 - 1083411 | 59907.0 |
| hypothetical protein | M099_1011 | Not Available | Positive | 1083562 - 1083810 | 9206.38 |
| acyltransferase family protein | M099_1012 | Not Available | Positive | 1083821 - 1084378 | 21350.4 |
| alpha-1,3-galactosidase b | M099_1013 | Not Available | Negative | 1084461 - 1086278 | 68990.9 |
| putative fibronectin type iii domain protein | M099_1014 | Not Available | Positive | 1086361 - 1089231 | 106854.0 |
| hypothetical protein | M099_1015 | Not Available | Positive | 1089322 - 1089639 | 12244.6 |
| radical sam superfamily protein | M099_1016 | Not Available | Positive | 1089691 - 1091580 | 72365.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

