Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0075 | Not Available | Positive | 75360 - 75614 | 9954.58 |
| trehalase family protein | M099_0076 | Not Available | Negative | 75709 - 77643 | 72859.6 |
| beta galactosidase small chain family protein | M099_0077 | Not Available | Negative | 77661 - 80837 | 121374.0 |
| hypothetical protein | M099_0078 | Not Available | Negative | 80851 - 81453 | 21649.9 |
| hypothetical protein | M099_0079 | Not Available | Negative | 81450 - 81731 | 10217.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 83005 - 83112 | Not Available |
| starch-binding associating with outer membrane family protein | M099_0080 | Not Available | Negative | 81846 - 83363 | 57946.4 |
| tonb-linked outer membrane, susc/raga family protein | M099_0081 | Not Available | Negative | 83384 - 86512 | 116548.0 |
| tpr repeat family protein | M099_0082 | Not Available | Negative | 86736 - 88361 | 63052.8 |
| ribonuclease hii family protein | M099_0083 | Not Available | Positive | 88463 - 89068 | 22930.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

