Bacteroides fragilis str. 3783N1-6

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis str. 3783N1-6 is a Gram-negative, rod-shaped bacterium classified as a chemoorganotroph, utilizing organic compounds for energy. This strain is characterized by its anaerobic metabolism, thriving in environments devoid of oxygen. Bacteroides fragilis str. 3783N1-6 is non-motile and exhibits a cell arrangement of singles, lacking the ability to form clusters. The strain possesses a single replicon and is surrounded by two membranes, a trait common among Gram-negative bacteria. It has an optimal growth temperature of 37°C, categorizing it as mesophilic, which is typical for many host-associated microorganisms. Its habitat is primarily host-associated, indicating a potential role in symbiotic relationships within the microbiota. One notable aspect of Bacteroides fragilis str. 3783N1-6 is its free-living biotic relationship, suggesting that while it may occur in a host environment, it can also survive independently. This characteristic may contribute to its ecological flexibility, allowing it to adapt to various environments within the gastrointestinal tract. Overall, the traits of Bacteroides fragilis str. 3783N1-6 highlight its importance in anaerobic environments, particularly in the human gut, where it plays a role in the complex microbial community. Its ability to thrive in a mesophilic range and its chemoorganotrophic metabolism underscore its ecological significance in nutrient cycling and maintaining gut health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strain3783N1-6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis str. 3783N1-6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Bacteroides fragilis str. 3783N1-6 gbf3783N16.contig.57, whole

Gene Summary

Adenine Count

1533021 bp

Thymine Count

1546646 bp

Guanine Count

1172144 bp

Cytosine Count

1184227 bp

Genome Length

5436038 bp

Protein-coding Genes

4860 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinM119_3014Not AvailableNegative3665432 - 366632834158.1
ferritinM119_3015Not AvailableNegative3666505 - 366698418065.4
diaminopimelate decarboxylaseM119_3016Not AvailableNegative3667122 - 366828542820.4
hypothetical proteinM119_3017Not AvailablePositive3668262 - 36684808587.25
aspartate kinase domain proteinM119_3018Not AvailableNegative3668442 - 366976149107.2
abc transporter family proteinM119_3019Not AvailableNegative3669793 - 367049126228.8
phosphoribosyl-atp diphosphataseM119_3020Not AvailableNegative3670476 - 367108723266.7
imidazoleglycerol phosphate synthase, cyclase subunitM119_3021Not AvailableNegative3671276 - 367202826918.0
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseM119_3022Not AvailableNegative3672130 - 367284926146.5
imidazole glycerol phosphate synthase, glutamine amidotransferase subunitM119_3023Not AvailableNegative3672889 - 367347922298.9

Displaying genes 3441 – 3450 of 5001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.