Sinomonas humi str. MUSC 117

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Sinomonas

Description

Sinomonas humi strain MUSC 117 is a bacterium characterized by a single replicon, indicating a streamlined genetic structure. The genomic information for this strain is accessible under the accession number JTDL00000000.1, which allows for detailed study and analysis of its genetic makeup. This bacterium belongs to the genus Sinomonas, which is known for its environmental significance, particularly in soil ecosystems. The presence of a single replicon may suggest a potential for efficient replication and adaptation to its ecological niche. While specific metabolic capabilities and ecological roles of Sinomonas humi strain MUSC 117 are not provided, bacteria within this genus typically play crucial roles in nutrient cycling and may contribute to soil fertility. Overall, understanding the genomic characteristics of Sinomonas humi strain MUSC 117 and its ecological context can provide insights into its function in soil environments, highlighting the importance of microbial diversity in maintaining ecosystem health and resilience. Further research into this strain could elucidate its contributions to biogeochemical processes and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusSinomonas
SpeciesSinomonas humi
StrainMUSC 117

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinomonas humi strain MUSC 117 Contig156, whole genome shotgun

Gene Summary

Adenine Count

723806 bp

Thymine Count

726275 bp

Guanine Count

1480144 bp

Cytosine Count

1485849 bp

Genome Length

4416081 bp

Protein-coding Genes

3445 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane proteinLK10_00345Not AvailableNegative75468 - 7618425176.3
pa-phosphataseLK10_00350Not AvailablePositive76252 - 7717531915.9
atpaseLK10_00355Not AvailableNegative77351 - 7825032181.3
hypothetical proteinLK10_00365Not AvailableNegative78809 - 7965730703.1
branched-chain alpha-keto acid dehydrogenase subunit e2LK10_00370Not AvailableNegative79721 - 8130454256.4
2-oxoisovalerate dehydrogenaseLK10_00375Not AvailableNegative81304 - 8239238948.5
pyruvate dehydrogenaseLK10_00380Not AvailableNegative82392 - 8356142551.9
transcriptional regulatorLK10_00385Not AvailablePositive83703 - 8415517026.5
hypothetical proteinLK10_00390Not AvailablePositive84152 - 843497680.92
glutamate decarboxylaseLK10_00400Not AvailableNegative86297 - 8771552517.1

Displaying genes 61 – 70 of 3505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.