Sinomonas humi str. MUSC 117

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Sinomonas

Description

Sinomonas humi strain MUSC 117 is a bacterium characterized by a single replicon, indicating a streamlined genetic structure. The genomic information for this strain is accessible under the accession number JTDL00000000.1, which allows for detailed study and analysis of its genetic makeup. This bacterium belongs to the genus Sinomonas, which is known for its environmental significance, particularly in soil ecosystems. The presence of a single replicon may suggest a potential for efficient replication and adaptation to its ecological niche. While specific metabolic capabilities and ecological roles of Sinomonas humi strain MUSC 117 are not provided, bacteria within this genus typically play crucial roles in nutrient cycling and may contribute to soil fertility. Overall, understanding the genomic characteristics of Sinomonas humi strain MUSC 117 and its ecological context can provide insights into its function in soil environments, highlighting the importance of microbial diversity in maintaining ecosystem health and resilience. Further research into this strain could elucidate its contributions to biogeochemical processes and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusSinomonas
SpeciesSinomonas humi
StrainMUSC 117

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinomonas humi strain MUSC 117 Contig156, whole genome shotgun

Gene Summary

Adenine Count

723806 bp

Thymine Count

726275 bp

Guanine Count

1480144 bp

Cytosine Count

1485849 bp

Genome Length

4416081 bp

Protein-coding Genes

3445 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubiquinone biosynthesis methyltransferase ubieLK10_00280Not AvailableNegative59111 - 5982126021.1
theronine dehydrogenaseLK10_00285Not AvailableNegative59938 - 6095434601.6
isochorismate synthaseLK10_00295Not AvailablePositive61823 - 6312446427.1
abc transporter substrate-binding proteinLK10_00300Not AvailablePositive63306 - 6424732040.5
arginine abc transporter atp-binding proteinLK10_00310Not AvailablePositive65326 - 6609628259.4
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseLK10_00315Not AvailableNegative66385 - 6808858919.2
dna repair proteinLK10_00320Not AvailableNegative68085 - 6866921545.6
uracil-dna glycosylaseLK10_00325Not AvailablePositive68679 - 6944927572.1
glucosidaseLK10_00335Not AvailablePositive71678 - 7437199916.8
o-succinylbenzoate synthaseLK10_00340Not AvailableNegative74458 - 7547135004.1

Displaying genes 51 – 60 of 3505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.