Vibrio parahaemolyticus O1:Kuk str. FDA_R31

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio parahaemolyticus O1:Kuk str. FDA_R31 is a Gram-negative, rod-shaped bacterium commonly found in aquatic environments. As a heterotroph, it derives energy from organic compounds, contributing to the nutrient cycling in its habitat. This organism is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions, which enhances its adaptability to varying environmental oxygen levels. Vibrio parahaemolyticus O1:Kuk str. FDA_R31 exhibits mobility due to the presence of flagella, which facilitates its movement in water. It typically exists as single cells rather than in clusters or chains. This species is mesophilic, with an optimal growth temperature of around 20°C, and it can survive within a defined temperature range suitable for mesophilic organisms. The bacterium possesses two replicons and two membranes, characteristic of Gram-negative bacteria, which may play a role in its adaptability and resistance to certain environmental stressors. As a free-living organism, it does not rely on a host for survival, allowing it to occupy various niches within aquatic ecosystems. The presence of Vibrio parahaemolyticus O1:Kuk str. FDA_R31 in aquatic environments highlights its role in the microbial community, particularly in nutrient cycling and potential interactions with other microorganisms. Its ability to thrive in varied conditions may influence the dynamics of aquatic ecosystems, especially in relation to food webs and ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio parahaemolyticus
StrainO1:Kuk FDA_R31

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio parahaemolyticus O1:Kuk str. FDA_R31
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome II,

Gene Summary

Adenine Count

512262 bp

Thymine Count

508020 bp

Guanine Count

419811 bp

Cytosine Count

421241 bp

Genome Length

1861334 bp

Protein-coding Genes

1636 genes

Non-Coding Genes

28 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator oparHK86_RS14575Not AvailablePositive3117989 - 311860323636.2
dihydrolipoyl dehydrogenaseHK86_RS14580Not AvailableNegative3118731 - 312015850990.9
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseHK86_RS14585Not AvailableNegative3120427 - 312234065902.7
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeHK86_RS14590Not AvailableNegative3122360 - 312502399669.6
pyruvate dehydrogenase complex transcriptional repressor pdhrHK86_RS14595Not AvailableNegative3125072 - 312583929136.8
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdHK86_RS14600Not AvailableNegative3126245 - 312679620874.7
carboxylating nicotinate-nucleotide diphosphorylaseHK86_RS14605Not AvailablePositive3126889 - 312777632091.3
pilinHK86_RS14610Not AvailablePositive3128040 - 312848015300.2
type iv-a pilus assembly atpase pilbHK86_RS14615Not AvailablePositive3128480 - 313016562331.1
type ii secretion system f family proteinHK86_RS14620Not AvailablePositive3130190 - 313141345264.2

Displaying genes 4571 – 4580 of 4807 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.