Vibrio parahaemolyticus O1:Kuk str. FDA_R31

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio parahaemolyticus O1:Kuk str. FDA_R31 is a Gram-negative, rod-shaped bacterium commonly found in aquatic environments. As a heterotroph, it derives energy from organic compounds, contributing to the nutrient cycling in its habitat. This organism is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions, which enhances its adaptability to varying environmental oxygen levels. Vibrio parahaemolyticus O1:Kuk str. FDA_R31 exhibits mobility due to the presence of flagella, which facilitates its movement in water. It typically exists as single cells rather than in clusters or chains. This species is mesophilic, with an optimal growth temperature of around 20°C, and it can survive within a defined temperature range suitable for mesophilic organisms. The bacterium possesses two replicons and two membranes, characteristic of Gram-negative bacteria, which may play a role in its adaptability and resistance to certain environmental stressors. As a free-living organism, it does not rely on a host for survival, allowing it to occupy various niches within aquatic ecosystems. The presence of Vibrio parahaemolyticus O1:Kuk str. FDA_R31 in aquatic environments highlights its role in the microbial community, particularly in nutrient cycling and potential interactions with other microorganisms. Its ability to thrive in varied conditions may influence the dynamics of aquatic ecosystems, especially in relation to food webs and ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio parahaemolyticus
StrainO1:Kuk FDA_R31

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio parahaemolyticus O1:Kuk str. FDA_R31
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio parahaemolyticus O1:Kuk str. FDA_R31 chromosome II,

Gene Summary

Adenine Count

512262 bp

Thymine Count

508020 bp

Guanine Count

419811 bp

Cytosine Count

421241 bp

Genome Length

1861334 bp

Protein-coding Genes

1636 genes

Non-Coding Genes

28 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sctd family type iii secretion system inner membrane ring subunit vscdHK86_RS08780Not AvailablePositive1889262 - 189056347975.3
esce/ysce/ssae family type iii secretion system needle protein co-chaperoneHK86_RS08785Not AvailablePositive1890550 - 18907597792.37
type iii secretion system needle filament protein vscfHK86_RS08790Not AvailablePositive1890771 - 18910199154.75
yscg family type iii secretion system chaperone vscgHK86_RS08795Not AvailablePositive1891023 - 189138212997.5
yopr family t3ss polymerization control protein vschHK86_RS08800Not AvailablePositive1891379 - 189200523349.8
scti family type iii secretion system inner rod subunit vsciHK86_RS08805Not AvailablePositive1892014 - 189235812745.2
sctj family type iii secretion inner membrane ring lipoprotein vscHK86_RS08810Not AvailablePositive1892358 - 189310427441.5
sctk family type iii secretion system sorting platform protein vsckHK86_RS08815Not AvailablePositive1893097 - 189376225929.8
sctl family type iii secretion system stator protein vsclHK86_RS08820Not AvailablePositive1893741 - 189437923489.2
cest family type iii secretion system chaperoneHK86_RS08825Not AvailablePositive1894592 - 189502015832.7

Displaying genes 3551 – 3560 of 4807 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.