Helicobacter pylori PZ5086

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori PZ5086 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and presence of flagella. This organism is typically found in host-associated environments, where it occupies the gastric mucosa of various hosts, including humans. H. pylori PZ5086 is known for its unique habitat, thriving under specific conditions that are conducive to its survival and growth. The bacterium is classified as mesophilic, with an optimal growth temperature of 37 degrees Celsius, which aligns with the typical human body temperature, further emphasizing its role as a pathogen in the gastric environment. H. pylori PZ5086 has a single replicon and is structured with two membranes, characteristics that are common among Gram-negative bacteria. Despite its free-living biotic relationship, H. pylori PZ5086 does not exhibit mobility, which may influence its ecological interactions within the host. The presence of flagella allows for some degree of movement in viscous environments, which is crucial for colonization and persistence within the gastric niche. The ecological insight derived from these traits suggests that H. pylori PZ5086 is well-adapted to the specialized conditions of the gastric environment, where it can exert significant effects on host health, including the potential to cause gastric inflammation and ulcers. Its ability to thrive in a microaerophilic atmosphere while adhering to the gastric mucosa demonstrates its evolutionary adaptation to a specific niche within the host. The accession number for this strain is ASYW00000000.1.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainPZ5086

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori PZ5086
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori PZ5086 NODE_9_length_7809_cov_225.323090,

Gene Summary

Adenine Count

477316 bp

Thymine Count

477715 bp

Guanine Count

304357 bp

Cytosine Count

300526 bp

Genome Length

1559914 bp

Protein-coding Genes

1603 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL935_03550Not AvailableNegative17535 - 20468111017.0
aminodeoxychorismate lyaseL935_03555Not AvailablePositive20425 - 2137535893.0
2-oxoglutarate:acceptor oxidoreductaseL935_03560Not AvailablePositive21560 - 2190112419.2
iceaL935_07005Not AvailablePositive22289 - 224596408.57
hypothetical proteinL935_07010Not AvailablePositive22727 - 2300210438.5
modification methylaseL935_07015Not AvailablePositive22983 - 2397237189.7
hydrolaseL935_07020Not AvailablePositive24161 - 2482925568.4
multidrug transporterL935_07025Not AvailableNegative24840 - 2657666290.7
Trna-thrNot AvailableNot AvailablePositive26773 - 26848Not Available
Trna-tyrNot AvailableNot AvailablePositive26876 - 26960Not Available

Displaying genes 41 – 50 of 1654 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.