Helicobacter pylori PZ5056

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori PZ5056 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This organism is associated with host environments, primarily found in the human stomach, where it can thrive at an optimal temperature of 37°C, fitting within the mesophilic temperature range. Notably, H. pylori PZ5056 exists as single cells rather than in clusters or chains. The bacterium is distinguished by its biotic relationship, which is categorized as free-living, allowing it to exist independently within its host environment. It has a unique cellular structure with two membranes and possesses a single replicon, indicating a streamlined genetic organization that is typical for many bacteria in its category. The implications of H. pylori's characteristics are significant in understanding its role in human health and disease. Its microaerophilic nature suggests that it thrives in environments with low oxygen levels, such as the human stomach, where it can contribute to various gastrointestinal conditions, including gastritis and peptic ulcers. The presence of flagella not only aids in its mobility but also may play a role in its ability to colonize the gastric epithelium, further emphasizing its ecological niche. In summary, Helicobacter pylori PZ5056 is adapted to survive in specific host-associated environments, exhibiting features that underline its pathogenic potential and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainPZ5056

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori PZ5056
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori PZ5056 NODE_9_length_27520_cov_135.953445,

Gene Summary

Adenine Count

492807 bp

Thymine Count

489698 bp

Guanine Count

308986 bp

Cytosine Count

311850 bp

Genome Length

1603341 bp

Protein-coding Genes

1695 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferaseL933_01615Not AvailableNegative1344463 - 134530431673.2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseL933_01620Not AvailableNegative1345307 - 134638639242.1
hypothetical proteinL933_01625Not AvailablePositive1346539 - 134766642902.5
udp-n-acetylmuramate--alanine ligaseL933_01630Not AvailablePositive1347659 - 134900850850.1
membrane proteinL933_01635Not AvailablePositive1349008 - 134939414147.6
dna mismatch repair protein mutsL933_01640Not AvailablePositive1349391 - 135164085243.7
inorganic pyrophosphataseL933_01645Not AvailableNegative1351781 - 135230219258.9
lipopolysaccharide biosynthesis proteinL933_01650Not AvailableNegative1352355 - 135365050344.8
adenylate kinaseL933_01655Not AvailableNegative1353675 - 135425021412.8
aspartyl-trna synthetaseL933_01660Not AvailableNegative1354267 - 135600065443.3

Displaying genes 1461 – 1470 of 1733 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.