Helicobacter pylori PZ5056

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori PZ5056 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This organism is associated with host environments, primarily found in the human stomach, where it can thrive at an optimal temperature of 37°C, fitting within the mesophilic temperature range. Notably, H. pylori PZ5056 exists as single cells rather than in clusters or chains. The bacterium is distinguished by its biotic relationship, which is categorized as free-living, allowing it to exist independently within its host environment. It has a unique cellular structure with two membranes and possesses a single replicon, indicating a streamlined genetic organization that is typical for many bacteria in its category. The implications of H. pylori's characteristics are significant in understanding its role in human health and disease. Its microaerophilic nature suggests that it thrives in environments with low oxygen levels, such as the human stomach, where it can contribute to various gastrointestinal conditions, including gastritis and peptic ulcers. The presence of flagella not only aids in its mobility but also may play a role in its ability to colonize the gastric epithelium, further emphasizing its ecological niche. In summary, Helicobacter pylori PZ5056 is adapted to survive in specific host-associated environments, exhibiting features that underline its pathogenic potential and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainPZ5056

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori PZ5056
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori PZ5056 NODE_9_length_27520_cov_135.953445,

Gene Summary

Adenine Count

492807 bp

Thymine Count

489698 bp

Guanine Count

308986 bp

Cytosine Count

311850 bp

Genome Length

1603341 bp

Protein-coding Genes

1695 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translocation protein, low temperatureL933_05320Not AvailablePositive1265025 - 126546216292.2
carbonate dehydrataseL933_05325Not AvailableNegative1265459 - 126781086338.9
o-methyltransferaseL933_05330Not AvailableNegative1267820 - 126853626596.3
riboflavin biosynthesis protein ribgL933_05335Not AvailableNegative1268518 - 126955239018.4
hypothetical proteinL933_05340Not AvailableNegative1269549 - 12697205930.42
ketohydroxyglutarate aldolaseL933_05795Not AvailablePositive1270039 - 127065922277.4
beta-lactamaseL933_05800Not AvailablePositive1270734 - 127160631601.8
oxidoreductaseL933_05805Not AvailableNegative1271846 - 127259827892.0
membrane proteinL933_05810Not AvailableNegative1272616 - 127415157839.6
Trna-alaNot AvailableNot AvailablePositive1274577 - 1274652Not Available

Displaying genes 1371 – 1380 of 1733 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.