Helicobacter pylori PZ5004

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori PZ5004 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and spirilla shape. It typically resides in host-associated habitats, indicating a close relationship with its host. The bacterium is notable for its single-cell arrangement and possesses flagella, contributing to its motility, though it is recorded as non-motile in this context. The optimal growth temperature for H. pylori PZ5004 is 37°C, placing it within the mesophilic temperature range, which is conducive to its survival in warm-blooded hosts. With a single replicon and two membranes, this bacterium exhibits a structural complexity that is consistent with its classification within the Helicobacter genus. The biotic relationship of H. pylori PZ5004 is categorized as free-living, suggesting it can survive independently, although its primary habitat is often within a host organism. This unique trait highlights its adaptability and potential roles in various ecological niches. Overall, the characteristics of Helicobacter pylori PZ5004 emphasize its specialized adaptations to a microaerophilic environment, which is critical for its survival in the gastric mucosa of hosts. Its presence in this specific habitat can have significant implications for human health, particularly in relation to gastric diseases, reinforcing the importance of understanding its biology and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainPZ5004

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori PZ5004
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori PZ5004 NODE_9_length_8998_cov_260.692596,

Gene Summary

Adenine Count

485908 bp

Thymine Count

485671 bp

Guanine Count

304800 bp

Cytosine Count

310120 bp

Genome Length

1586499 bp

Protein-coding Genes

1662 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL930_07000Not AvailableNegative929580 - 92998715491.5
vird4 coupling proteinL930_07005Not AvailableNegative930021 - 93182368438.8
replication regulatory repb family proteinL930_07010Not AvailableNegative931820 - 93233820146.5
conjugal transfer protein trbbL930_07015Not AvailableNegative932335 - 93327935744.2
hypothetical proteinL930_07020Not AvailableNegative933284 - 93355910910.0
membrane proteinL930_07025Not AvailableNegative934550 - 937981125992.0
comb8 competence proteinL930_07030Not AvailableNegative939628 - 94076444009.6
virb7 type iv secretion proteinL930_07035Not AvailableNegative940757 - 9408975340.91
transporterL930_07040Not AvailableNegative940894 - 94347098604.0
hypothetical proteinL930_07045Not AvailableNegative943470 - 9437069018.87

Displaying genes 1041 – 1050 of 1696 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.