Helicobacter pylori PZ5004

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori PZ5004 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and presence as single cells. This strain thrives optimally at 37.0°C, which coincides with the average human body temperature, indicating its adaptation to a host-associated habitat. Helicobacter pylori is well-known for its colonization of the gastric mucosa, where it can establish a complex relationship with the host's immune system. Its microaerophilic nature suggests a requirement for reduced oxygen levels, which is consistent with its ecological niche within the gastric environment. The unique spiral morphology of H. pylori is thought to facilitate its motility through the viscous mucus lining of the stomach, potentially enhancing its ability to colonize and persist in this hostile environment. The specific traits of PZ5004 may contribute to its survival and adaptability within the varied microenvironments of the gastric niche, offering insights into the evolutionary mechanisms that allow H. pylori to thrive in such a competitive and dynamic ecosystem. Understanding these traits may provide a clearer picture of the ecological role H. pylori plays in relation to its host and its potential interactions with other microbial communities present in the gastrointestinal tract.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainPZ5004

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori PZ5004
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori PZ5004


Gene Summary

Adenine Count

485908 bp

Thymine Count

485671 bp

Guanine Count

304800 bp

Cytosine Count

310120 bp

Genome Length

1586499 bp

Protein-coding Genes

1662 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
acetone carboxylase subunit alphaL930_00100Not Available+220 - 142745634.7
5s ribosomal rnaNot AvailableNot Available+549 - 666Not Available
hypothetical proteinL930_05275Not Available+1428 - 193419111.2
hypothetical proteinL930_05280Not Available+2455 - 277511566.7
glutathionylspermidine synthaseL930_04595Not Available+2889 - 406145434.9
membrane proteinL930_04600Not Available+4061 - 459120314.7
hypothetical proteinL930_04605Not Available-4576 - 47045137.33
beta-lactamaseL930_04610Not Available-5368 - 643239332.9
cytochrome c oxidase subunit iiiL930_04615Not Available-6526 - 689113804.9
porphobilinogen deaminaseL930_04620Not Available-6891 - 781133950.8

Displaying genes 1 – 10 of 1696 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites