Burkholderia sp. AU4i

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. AU4i is a bacterium characterized by possessing a single replicon, indicating a streamlined genomic organization. It is cataloged under the accession number ASSI00000000.1, which provides a reference for further study and analysis of its genetic makeup. Burkholderia species are known for their diverse metabolic capabilities and environmental adaptability. While specific ecological roles or functions of Burkholderia sp. AU4i have not been detailed in the provided information, Burkholderia species are generally recognized for their involvement in soil ecosystems, where they can contribute to nutrient cycling and the degradation of organic compounds. The presence of a single replicon could suggest a potential for efficient replication and stability within its environment, traits that may enhance its survival and functional contributions in natural settings. This characteristic, combined with the known adaptability of the Burkholderia genus, may allow Burkholderia sp. AU4i to thrive in various ecological niches. In conclusion, while the specific biological roles of Burkholderia sp. AU4i remain unspecified, its single replicon structure hints at a level of genomic efficiency that could facilitate its ecological functions, potentially aiding in nutrient cycling and organic matter decomposition within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. AU4i
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. AU4i contig506, whole genome shotgun sequence.

Gene Summary

Adenine Count

1567772 bp

Thymine Count

1568228 bp

Guanine Count

3068841 bp

Cytosine Count

3063133 bp

Genome Length

9267974 bp

Protein-coding Genes

8529 genes

Non-Coding Genes

215 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vapc toxin proteinL810_1781Not AvailableNegative6368019 - 636842314467.7
vapb protein (antitoxin to vapc)L810_1782Not AvailableNegative6368420 - 636869210322.3
incc proteinL810_1783Not AvailablePositive6369219 - 637009131004.5
hypothetical proteinL810_1784Not AvailablePositive6370084 - 637066820718.1
bores hole in peptidoglycan layer allowing type iv secretion complex assembly to occur (virb1)L810_1785Not AvailablePositive6370665 - 637134223633.0
major pilus subunit of type iv secretion complex (virb2)L810_1786Not AvailablePositive6371566 - 63717215364.84
inner membrane protein forms channel for type iv secretion of t-dna complex (virb3)L810_1787Not AvailablePositive6371735 - 637206712249.6
atpaseL810_1788Not AvailablePositive6372069 - 637453792004.1
integral inner membrane protein of type iv secretion complex (virb6)L810_1789Not AvailablePositive6374534 - 637569138830.7
minor pilin of type iv secretion complex (virb5)L810_1790Not AvailablePositive6375688 - 637639825759.7

Displaying genes 6111 – 6120 of 8744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.