Roseomonas rhizosphaerae str. YW11

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Roseomonadaceae

Genus

Roseomonas

Description

Roseomonas rhizosphaerae strain YW11 is characterized as a Gram-negative, rod-shaped bacterium. It possesses flagella, which suggests it has the capability for motility. Genomically, this strain contains a single replicon, indicating a streamlined genetic organization. The strain is cataloged under the accession number PDNU00000000.1. As a member of the Roseomonas genus, R. rhizosphaerae likely plays a role in various ecological interactions, particularly in rhizosphere environments where it may influence plant health and soil dynamics. The presence of flagella may enhance its ability to navigate through soil microenvironments, allowing it to establish beneficial relationships with plant roots or other microorganisms. The specific traits of R. rhizosphaerae str. YW11 suggest potential applications in agriculture or bioremediation, where understanding microbial motility and interactions in the rhizosphere can be crucial for promoting plant growth or soil health. Further exploration of its ecological roles and interactions within its native niches could provide insights into its utility in sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyRoseomonadaceae
GenusRoseomonas
SpeciesTeichococcus rhizosphaerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Roseomonas rhizosphaerae str. YW11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoroseomonas rhizosphaerae strain YW11 contig114, whole genome

Gene Summary

Adenine Count

651356 bp

Thymine Count

657769 bp

Guanine Count

1673069 bp

Cytosine Count

1671541 bp

Genome Length

4653735 bp

Protein-coding Genes

4196 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylmuramoyl-l-alanine amidaseCR162_07305Not AvailablePositive1576318 - 157703725821.8
transcriptional regulator mrazCR162_07315Not AvailablePositive1577824 - 157828517130.5
16s rrna (cytosine(1402)-n(4))-methyltransferaseCR162_07320Not AvailablePositive1578282 - 157921132947.6
hypothetical proteinCR162_07325Not AvailablePositive1579211 - 158011330416.6
penicillin-binding proteinCR162_07330Not AvailablePositive1580120 - 158220773801.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseCR162_07335Not AvailablePositive1582212 - 158368150502.8
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseCR162_07340Not AvailablePositive1583678 - 158510248720.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseCR162_07345Not AvailablePositive1585099 - 158618738870.8
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseCR162_07350Not AvailablePositive1586189 - 158759547774.1
cell division protein ftswCR162_07355Not AvailablePositive1587595 - 158871639630.9

Displaying genes 1461 – 1470 of 4264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.