Roseomonas rhizosphaerae str. YW11

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Roseomonadaceae

Genus

Roseomonas

Description

Roseomonas rhizosphaerae strain YW11 is characterized as a Gram-negative, rod-shaped bacterium. It possesses flagella, which suggests it has the capability for motility. Genomically, this strain contains a single replicon, indicating a streamlined genetic organization. The strain is cataloged under the accession number PDNU00000000.1. As a member of the Roseomonas genus, R. rhizosphaerae likely plays a role in various ecological interactions, particularly in rhizosphere environments where it may influence plant health and soil dynamics. The presence of flagella may enhance its ability to navigate through soil microenvironments, allowing it to establish beneficial relationships with plant roots or other microorganisms. The specific traits of R. rhizosphaerae str. YW11 suggest potential applications in agriculture or bioremediation, where understanding microbial motility and interactions in the rhizosphere can be crucial for promoting plant growth or soil health. Further exploration of its ecological roles and interactions within its native niches could provide insights into its utility in sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyRoseomonadaceae
GenusRoseomonas
SpeciesTeichococcus rhizosphaerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Roseomonas rhizosphaerae str. YW11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoroseomonas rhizosphaerae strain YW11 contig114, whole genome

Gene Summary

Adenine Count

651356 bp

Thymine Count

657769 bp

Guanine Count

1673069 bp

Cytosine Count

1671541 bp

Genome Length

4653735 bp

Protein-coding Genes

4196 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase, hydrophobic membrane anchor proteinCR162_05115Not AvailableNegative1095992 - 109638714113.8
succinate dehydrogenase, cytochrome b556 subunitCR162_05120Not AvailableNegative1096398 - 109684416354.2
hypothetical proteinCR162_05125Not AvailableNegative1097126 - 10974048775.46
aspartate-semialdehyde dehydrogenaseCR162_05130Not AvailableNegative1097545 - 109857637060.5
c4-dicarboxylate abc transporter substrate-binding proteinCR162_05135Not AvailableNegative1098799 - 109979435233.4
hypothetical proteinCR162_05140Not AvailablePositive1099975 - 110040615468.0
hydrogenaseCR162_05145Not AvailableNegative1100694 - 110131721869.7
hydrogenase expression protein hypeCR162_05150Not AvailableNegative1101344 - 110278650482.9
hydrogenase 4 subunit fCR162_05155Not AvailableNegative1102881 - 110432948577.7
hydrogenase-4 component eCR162_05160Not AvailableNegative1104326 - 110500322450.4

Displaying genes 1031 – 1040 of 4264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.