Tepidicaulis marinus str. MA2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Parvibaculaceae

Genus

Tepidicaulis

Description

Tepidicaulis marinus strain MA2 is characterized by having a single replicon, which indicates a streamlined genetic structure. The genome of this strain is cataloged under the accession number BBIO00000000.1, providing a reference for further studies and comparisons within the genus Tepidicaulis and related microbial taxa. As a member of the Tepidicaulis genus, which includes other thermophilic microorganisms, T. marinus str. MA2 is likely adapted to thrive in moderately high-temperature environments. Such adaptations may involve specialized metabolic pathways that enable survival in conditions that may be inhospitable to many other organisms. Understanding the genomic features of T. marinus str. MA2 can offer insights into its ecological roles, particularly in marine environments where it may contribute to nutrient cycling and the degradation of organic matter. Furthermore, the presence of a single replicon may suggest evolutionary advantages in terms of genetic stability and efficient replication, which can be beneficial in fluctuating environmental conditions. Overall, studying Tepidicaulis marinus str. MA2 not only enhances our understanding of microbial diversity but also provides valuable insights into the ecological functions of thermophilic bacteria in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyParvibaculaceae
GenusTepidicaulis
SpeciesTepidicaulis marinus
StrainMA2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tepidicaulis marinus DNA, contig: scaffold00046, whole genome

Gene Summary

Adenine Count

675972 bp

Thymine Count

675808 bp

Guanine Count

1052619 bp

Cytosine Count

1071337 bp

Genome Length

3475736 bp

Protein-coding Genes

3365 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane bound o-acyl transferase mboat family proteinM2A_0339Not AvailablePositive324805 - 32628355415.1
conserved exported hypothetical proteinM2A_0340Not AvailablePositive326287 - 32750144918.6
2-polyprenylphenol 6-hydroxylaseM2A_0341Not AvailableNegative327504 - 32909659003.3
ubiquinone/menaquinone biosynthesis methyltransferaseM2A_0342Not AvailableNegative329100 - 32990329685.3
formamidopyrimidine-dna glycosylaseM2A_0343Not AvailablePositive330098 - 33100332869.6
enoyl-coa hydratase/isomeraseM2A_0344Not AvailablePositive331090 - 33186328001.0
ribosomal protein s20M2A_0345Not AvailablePositive332134 - 3324009884.12
rhodanese domain-containing proteinM2A_0346Not AvailablePositive333043 - 33350416569.6
chromosomal replication initiator protein dnaaM2A_0347Not AvailablePositive333727 - 33524156140.4
dna polymerase iii subunit betaM2A_0348Not AvailablePositive335657 - 33677240418.2

Displaying genes 341 – 350 of 3446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

10 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002033L-altrarateC6H8O8Chemical structure of L-altrarateNot available
Average208.123Da
Monoisotopic208.0230144Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm00021245-dehydro-4-deoxy-D-glucarateC6H6O7Chemical structure of 5-dehydro-4-deoxy-D-glucarateNot available
Average190.1076Da
Monoisotopic190.0113525Da
BASm00028782-oxo-3-sulfanylpropanoateC3H3O3SChemical structure of 2-oxo-3-sulfanylpropanoateNot available
Average119.11Da
Monoisotopic118.9808387Da
BASm00033572-oxo-2H-pyran-4,6-dicarboxylateC7H2O6Chemical structure of 2-oxo-2H-pyran-4,6-dicarboxylateNot available
Average182.088Da
Monoisotopic181.9862349Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0011787(S)-2-hydroxymethylglutarateC6H8O5Chemical structure of (S)-2-hydroxymethylglutarateNot available
Average160.126Da
Monoisotopic160.038270517Da

Displaying 1–10 of 10 metabolites

Health Effects

No health effects information available for this bacterium.