Aquipseudomonas alcaligenes OT 69

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Aquipseudomonas

Description

Aquipseudomonas alcaligenes OT 69 is an aerobic bacterium, meaning it requires oxygen for its growth and metabolic processes. This species is characterized by a single replicon, indicating a streamlined genetic structure that can influence its adaptability and efficiency in various environments. Notably, Aquipseudomonas alcaligenes OT 69 has been identified in association with the host organism Crassostrea virginica, commonly known as the Eastern oyster. This relationship suggests a potential ecological role for the bacterium in marine environments, particularly in relation to the health and sustainability of oyster populations. The accession number for this organism is ATCP00000000.1, which serves as a reference for genetic and genomic studies. The unique traits of Aquipseudomonas alcaligenes OT 69 highlight its significance in the context of microbial ecology, particularly in the interplay between bacteria and marine host organisms. Understanding its relationships and functions could provide insights into the dynamics of microbial communities in aquatic ecosystems, as well as the health and resilience of economically important species like the Eastern oyster.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusAquipseudomonas
SpeciesAquipseudomonas alcaligenes
StrainOT 69

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Crassostrea virginica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas alcaligenes OT 69 contig99, whole genome shotgun

Gene Summary

Adenine Count

1205717 bp

Thymine Count

1186879 bp

Guanine Count

2297127 bp

Cytosine Count

2339960 bp

Genome Length

7029683 bp

Protein-coding Genes

6233 genes

Non-Coding Genes

216 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arsc family transcriptional regulatorL682_14000Not AvailablePositive3125295 - 312564212983.7
2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferaseL682_14005Not AvailablePositive3125720 - 312675436036.4
bifunctional cysteine desulfurase/selenocysteine lyaseL682_14010Not AvailablePositive3126857 - 312805943073.5
hypothetical proteinL682_14015Not AvailablePositive3128056 - 312846014806.7
thif domain-containing proteinL682_14020Not AvailableNegative3128594 - 312939728199.0
hypothetical proteinL682_14025Not AvailablePositive3129551 - 313069941533.7
beta-(1-3)-glucosyl transferaseL682_14030Not AvailablePositive3130921 - 313351297081.6
succinyl-diaminopimelate desuccinylaseL682_14035Not AvailablePositive3133607 - 313474640835.8
sam-dependent methlyltransferaseL682_14040Not AvailablePositive3134749 - 313555229753.6
hypothetical proteinL682_14045Not AvailablePositive3135563 - 313593413602.7

Displaying genes 2951 – 2960 of 6449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.