Ruminiclostridium papyrosolvens C7

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminiclostridium

Description

Ruminiclostridium papyrosolvens C7 is a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is characteristic of its genomic organization. The strain is documented under the accession number ATAY00000000.1, indicating its availability for further study and characterization. This bacterium is notable for its potential role in the degradation of plant materials, specifically cellulose. Ruminiclostridium species are generally known for their ability to break down complex carbohydrates, suggesting that R. papyrosolvens C7 may contribute to nutrient cycling in its environment. The presence of such microorganisms in the gut of herbivores is essential for the digestion of fibrous plant materials, thus facilitating energy acquisition from otherwise indigestible sources. Understanding the traits of Ruminiclostridium papyrosolvens C7 can provide insights into its ecological role, particularly in microbial communities involved in the decomposition of organic matter. This trait is important for maintaining soil health and fertility, as well as for the broader ecosystem functions related to carbon cycling. Overall, Ruminiclostridium papyrosolvens C7 exemplifies the complex interactions that occur within microbial communities and their significance in ecological processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminiclostridium
SpeciesRuminiclostridium papyrosolvens
StrainC7

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminiclostridium papyrosolvens C7 contig01669, whole genome

Gene Summary

Adenine Count

1346638 bp

Thymine Count

1420089 bp

Guanine Count

786490 bp

Cytosine Count

847717 bp

Genome Length

4400934 bp

Protein-coding Genes

3709 genes

Non-Coding Genes

230 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionyl-trna synthetaseL323_08835Not AvailablePositive1948344 - 195030874683.2
endoglucanaseL323_08840Not AvailablePositive1950791 - 195221553393.3
hypothetical proteinL323_08845Not AvailablePositive1952356 - 195323132734.3
hypothetical proteinL323_08850Not AvailablePositive1953221 - 195428841374.9
hypothetical proteinL323_08855Not AvailablePositive1954390 - 195507625021.6
transcriptional regulatorL323_08860Not AvailablePositive1955166 - 195563617725.7
spore coat protein cothL323_08865Not AvailableNegative1955883 - 195774568407.8
udp-n-acetyl-d-galactosamine dehydrogenaseL323_08870Not AvailableNegative1958263 - 195958248603.6
4fe-4s ferredoxinL323_08875Not AvailablePositive1959744 - 196052928829.8
hypothetical proteinL323_08880Not AvailablePositive1960885 - 196137918354.3

Displaying genes 1891 – 1900 of 3939 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.