Ruminiclostridium papyrosolvens C7

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminiclostridium

Description

Ruminiclostridium papyrosolvens C7 is a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is characteristic of its genomic organization. The strain is documented under the accession number ATAY00000000.1, indicating its availability for further study and characterization. This bacterium is notable for its potential role in the degradation of plant materials, specifically cellulose. Ruminiclostridium species are generally known for their ability to break down complex carbohydrates, suggesting that R. papyrosolvens C7 may contribute to nutrient cycling in its environment. The presence of such microorganisms in the gut of herbivores is essential for the digestion of fibrous plant materials, thus facilitating energy acquisition from otherwise indigestible sources. Understanding the traits of Ruminiclostridium papyrosolvens C7 can provide insights into its ecological role, particularly in microbial communities involved in the decomposition of organic matter. This trait is important for maintaining soil health and fertility, as well as for the broader ecosystem functions related to carbon cycling. Overall, Ruminiclostridium papyrosolvens C7 exemplifies the complex interactions that occur within microbial communities and their significance in ecological processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminiclostridium
SpeciesRuminiclostridium papyrosolvens
StrainC7

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminiclostridium papyrosolvens C7 contig01669, whole genome

Gene Summary

Adenine Count

1346638 bp

Thymine Count

1420089 bp

Guanine Count

786490 bp

Cytosine Count

847717 bp

Genome Length

4400934 bp

Protein-coding Genes

3709 genes

Non-Coding Genes

230 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttrNot AvailableNot AvailablePositive1939076 - 1939087Not Available
hypothetical proteinL323_08760Not AvailableNegative1939094 - 19393368945.25
hypothetical proteinL323_08765Not AvailableNegative1939378 - 19395787747.21
Gp26L323_08770Not AvailableNegative1939582 - 193992913983.8
Hypothetical proteinL323_08775Not AvailableNegative1939930 - 194023511835.7
Hypothetical proteinL323_08780Not AvailableNegative1940235 - 194087324918.5
Yopx-like proteinL323_08785Not AvailableNegative1940875 - 194129116277.9
AttlNot AvailableNot AvailablePositive3191616 - 3191629Not Available
Transcription state regulatory protein abrbL323_14825Not AvailablePositive3202421 - 320297520250.3
Single-stranded dna-binding proteinL323_14830Not AvailablePositive3203334 - 320370514207.7

Displaying genes 101 – 110 of 3939 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.