Lampropedia puyangensis str. 2-bin

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Lampropedia

Description

Lampropedia puyangensis str. 2-bin is characterized by the presence of flagella, which typically indicates motility and the potential for a more dynamic interaction with its environment. The organism is noted to have a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and cellular function. This trait can be significant in understanding the organism's adaptability and evolutionary strategies. The accession number for Lampropedia puyangensis str. 2-bin is STFG00000000.1, which can be used for further exploration of its genomic sequence and related data. Access to this genomic information is essential for taxonomic classification and can provide insights into the organism’s metabolic capabilities and ecological roles. In summary, the presence of flagella may enhance the organism's ability to navigate its habitat, potentially influencing its ecological interactions and niche within microbial communities. The single replicon indicates a simplified genetic architecture, which may correlate with specific adaptive strategies in its environment. Understanding these traits can contribute to broader ecological insights into the role of Lampropedia puyangensis str. 2-bin in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLampropedia
SpeciesLampropedia puyangensis
Strain2-bin

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lampropedia puyangensis strain 2-bin Scaffold76, whole genome

Gene Summary

Adenine Count

913152 bp

Thymine Count

916465 bp

Guanine Count

1076558 bp

Cytosine Count

1068236 bp

Genome Length

3974686 bp

Protein-coding Genes

3367 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxo acid dehydrogenase subunit e2E9531_01345Not AvailableNegative336926 - 33825746615.9
alpha-ketoacid dehydrogenase subunit betaE9531_01350Not AvailableNegative338259 - 33926336435.7
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alphaE9531_01355Not AvailableNegative339275 - 34053446069.8
mfs transporterE9531_01360Not AvailablePositive340967 - 34218143493.2
4-hydroxy-tetrahydrodipicolinate synthaseE9531_01365Not AvailablePositive342540 - 34343932078.7
outer membrane protein assembly factor bamcE9531_01370Not AvailablePositive343577 - 34471941657.9
mbl fold metallo-hydrolaseE9531_01375Not AvailablePositive344744 - 34566433327.5
aspartate/tyrosine/aromatic aminotransferaseE9531_01380Not AvailableNegative346232 - 34742842629.0
tripartite tricarboxylate transporter substrate binding proteinE9531_01385Not AvailableNegative347638 - 34861534829.7
excinuclease abc subunit uvrbE9531_01390Not AvailablePositive348855 - 35093378561.8

Displaying genes 271 – 280 of 3426 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.