Lampropedia puyangensis str. 2-bin

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Lampropedia

Description

Lampropedia puyangensis str. 2-bin is characterized by the presence of flagella, which typically indicates motility and the potential for a more dynamic interaction with its environment. The organism is noted to have a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and cellular function. This trait can be significant in understanding the organism's adaptability and evolutionary strategies. The accession number for Lampropedia puyangensis str. 2-bin is STFG00000000.1, which can be used for further exploration of its genomic sequence and related data. Access to this genomic information is essential for taxonomic classification and can provide insights into the organism’s metabolic capabilities and ecological roles. In summary, the presence of flagella may enhance the organism's ability to navigate its habitat, potentially influencing its ecological interactions and niche within microbial communities. The single replicon indicates a simplified genetic architecture, which may correlate with specific adaptive strategies in its environment. Understanding these traits can contribute to broader ecological insights into the role of Lampropedia puyangensis str. 2-bin in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLampropedia
SpeciesLampropedia puyangensis
Strain2-bin

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lampropedia puyangensis strain 2-bin Scaffold76, whole genome

Gene Summary

Adenine Count

913152 bp

Thymine Count

916465 bp

Guanine Count

1076558 bp

Cytosine Count

1068236 bp

Genome Length

3974686 bp

Protein-coding Genes

3367 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorE9531_12660Not AvailablePositive2883371 - 288540172827.0
trap transporter large permease subunitE9531_12665Not AvailableNegative2885549 - 288684445750.8
trap transporter small permease subunitE9531_12670Not AvailableNegative2886837 - 288735818926.5
c4-dicarboxylate abc transporter substrate-binding proteinE9531_12675Not AvailableNegative2887511 - 288849435499.3
gntr family transcriptional regulatorE9531_12680Not AvailableNegative2889104 - 288977524769.0
lamb/ycsf family proteinE9531_12685Not AvailablePositive2889892 - 289065626460.7
5-oxoprolinase/urea amidolyase family proteinE9531_12690Not AvailablePositive2890653 - 289238060348.4
atp-grasp domain-containing proteinE9531_12695Not AvailablePositive2892386 - 289413462001.0
tonb-dependent siderophore receptorE9531_12700Not AvailablePositive2894326 - 289649479849.0
aec family transporterE9531_12705Not AvailableNegative2896884 - 289793036869.9

Displaying genes 2511 – 2520 of 3426 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.