Rhizobium etli bv. mimosae str. Mim1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium etli bv. mimosae str. Mim1 is a gram-negative, mesophilic bacterium that exhibits a rod-shaped morphology and is known for its mobility, facilitated by the presence of flagella. This organism is typically found in host-associated habitats, where it engages in a symbiotic relationship with certain plants. The bacterium is classified as an aerobe, meaning it requires oxygen for growth. It possesses a unique cellular structure characterized by two membranes and has a total of seven replicons, which are important for its genetic stability and replication. The symbiotic relationship between Rhizobium etli bv. mimosae str. Mim1 and its host plants, such as legumes, is crucial for nitrogen fixation. This process enhances soil fertility and supports plant growth, which can have significant ecological implications. By converting atmospheric nitrogen into a form that plants can utilize, this bacterium plays a vital role in nutrient cycling within ecosystems. The genetic diversity of this strain is reflected in its multiple accessions, including NC_021905.1, NC_021906.1, NC_021907.1, NC_021908.1, NC_021909.1, NC_021910.1, and NC_021911.1, further supporting its adaptability and functional capabilities in various ecological contexts. This adaptability underscores the importance of Rhizobium etli bv. mimosae str. Mim1 in agricultural and natural ecosystems, contributing to sustainable practices through its role in enhancing soil quality and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium etli
Strainbv. mimosae Mim1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium etli bv. mimosae str. Mim1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1a, complete

Gene Summary

Adenine Count

34160 bp

Thymine Count

35138 bp

Guanine Count

56319 bp

Cytosine Count

55696 bp

Genome Length

181313 bp

Protein-coding Genes

174 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1330 domain-containing proteinREMIM1_RS02005Not AvailableNegative319057 - 31934410629.7
orotidine-5'-phosphate decarboxylaseREMIM1_RS02010Not AvailableNegative319367 - 32007424634.0
histidine phosphatase family proteinREMIM1_RS02015Not AvailableNegative320081 - 32066220713.4
phospholipid n-methyltransferase pmtaREMIM1_RS02020Not AvailableNegative320664 - 32126322341.4
duf72 domain-containing proteinREMIM1_RS02025Not AvailableNegative321359 - 32226434744.5
dna polymerase iii subunit betaREMIM1_RS02030Not AvailableNegative322319 - 32343740438.4
16s rrna (cytidine(1402)-2'-o)-methyltransferaseREMIM1_RS02035Not AvailablePositive323695 - 32461232589.1
yran family proteinREMIM1_RS02040Not AvailablePositive324602 - 32497013797.0
cupin domain-containing proteinREMIM1_RS02045Not AvailablePositive325090 - 32559318393.0
glutathione synthaseREMIM1_RS02050Not AvailablePositive325681 - 32662835371.6

Displaying genes 2821 – 2830 of 6914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

36 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 36 metabolites

Health Effects

No health effects information available for this bacterium.