Rhizobium etli bv. mimosae str. Mim1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium etli bv. mimosae str. Mim1 is a gram-negative, mesophilic bacterium that exhibits a rod-shaped morphology and is known for its mobility, facilitated by the presence of flagella. This organism is typically found in host-associated habitats, where it engages in a symbiotic relationship with certain plants. The bacterium is classified as an aerobe, meaning it requires oxygen for growth. It possesses a unique cellular structure characterized by two membranes and has a total of seven replicons, which are important for its genetic stability and replication. The symbiotic relationship between Rhizobium etli bv. mimosae str. Mim1 and its host plants, such as legumes, is crucial for nitrogen fixation. This process enhances soil fertility and supports plant growth, which can have significant ecological implications. By converting atmospheric nitrogen into a form that plants can utilize, this bacterium plays a vital role in nutrient cycling within ecosystems. The genetic diversity of this strain is reflected in its multiple accessions, including NC_021905.1, NC_021906.1, NC_021907.1, NC_021908.1, NC_021909.1, NC_021910.1, and NC_021911.1, further supporting its adaptability and functional capabilities in various ecological contexts. This adaptability underscores the importance of Rhizobium etli bv. mimosae str. Mim1 in agricultural and natural ecosystems, contributing to sustainable practices through its role in enhancing soil quality and plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium etli
Strainbv. mimosae Mim1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhizobium etli bv. mimosae str. Mim1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

34160 bp

Thymine Count

35138 bp

Guanine Count

56319 bp

Cytosine Count

55696 bp

Genome Length

181313 bp

Protein-coding Genes

174 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldose 1-epimerase family proteinREMIM1_RS21030Not AvailableNegative11124 - 1199330865.7
duf6665 family proteinREMIM1_RS21035Not AvailableNegative12081 - 1241012424.8
abc-f family atp-binding cassette domain-containing proteinREMIM1_RS21040Not AvailablePositive12551 - 1417360184.1
hypothetical proteinREMIM1_RS21045Not AvailablePositive14394 - 1492119151.4
duf1328 domain-containing proteinREMIM1_RS35705Not AvailablePositive15021 - 151855871.71
duf992 domain-containing proteinREMIM1_RS21055Not AvailablePositive15513 - 1603417547.9
sugar abc transporter permeaseREMIM1_RS21060Not AvailablePositive16111 - 1657716639.0
lysr substrate-binding domain-containing proteinREMIM1_RS21065Not AvailableNegative16635 - 1756433924.7
dmt family transporterREMIM1_RS21070Not AvailablePositive17638 - 1855531702.8
deor/glpr family dna-binding transcription regulatorREMIM1_RS21075Not AvailablePositive18664 - 1943727781.4

Displaying genes 11 – 20 of 6914 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

36 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 36 metabolites

Health Effects

No health effects information available for this bacterium.