Sphingomonas psychrotolerans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas psychrotolerans is a rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This species is notable for its ability to thrive in cold environments, reflecting its classification as a psychrotolerant organism. The genomic information of Sphingomonas psychrotolerans is encapsulated in a single replicon, which indicates that it possesses a circular chromosome contributing to its genetic stability and replication. Its genomic data can be accessed through the accession number NZ_CP024923.1, which allows for further investigation into its genetic features and potential applications. Ecologically, Sphingomonas psychrotolerans may play a significant role in cold environments, potentially contributing to biogeochemical cycles and the degradation of organic matter. Its psychrotolerant nature suggests that it could be involved in the breakdown of pollutants or organic compounds in cold ecosystems, thereby impacting nutrient cycling and ecosystem health. Understanding the capabilities and interactions of Sphingomonas psychrotolerans in its native habitats may offer insights into microbial resilience and adaptation to environmental stressors.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas psychrotolerans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas psychrotolerans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas psychrotolerans strain Cra20 chromosome, complete

Gene Summary

Adenine Count

837528 bp

Thymine Count

837802 bp

Guanine Count

1606023 bp

Cytosine Count

1601637 bp

Genome Length

4882990 bp

Protein-coding Genes

4430 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Capsid and scaffold proteinCVN68_RS16390Not AvailablePositive3584729 - 358697881195.2
Minor tail proteinCVN68_RS16395Not AvailablePositive3586975 - 358778128415.9
Hypothetical proteinCVN68_RS16400Not AvailablePositive3587778 - 358817613762.6
Gene transfer agent host specificity proteinCVN68_RS16405Not AvailablePositive3588178 - 359034374891.5
Hypothetical proteinCVN68_RS16410Not AvailablePositive3590343 - 359084617382.7
cap domain-containing proteinCVN68_RS00010Not AvailableNegative1486 - 252336336.1
thua domain-containing proteinCVN68_RS00015Not AvailableNegative2620 - 344430140.0
tryptophan--trna ligaseCVN68_RS00020Not AvailableNegative3546 - 455036127.3
murein biosynthesis integral membrane protein murjCVN68_RS00025Not AvailableNegative4553 - 613656164.1
protein-export chaperone secbCVN68_RS00030Not AvailableNegative6190 - 669918168.4

Displaying genes 31 – 40 of 4508 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.