Paraburkholderia caribensis MBA4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caribensis MBA4 is a rod-shaped bacterium characterized by the presence of flagella, which enable motility. This organism possesses three replicons, indicating a complex genomic structure that may play a role in its adaptability and functional diversity. The genomic information of P. caribensis MBA4 is accessible through several accession numbers: NZ_CP012746.1, NZ_CP012747.1, and NZ_CP012748.1, which provide valuable resources for further research and understanding of this species. The motile nature of Paraburkholderia caribensis MBA4 suggests potential ecological roles in its native environment, likely involving interactions with other microorganisms and participation in nutrient cycling. Its rod shape can contribute to its ability to inhabit diverse environments, as this morphology is often associated with efficient nutrient uptake and colonization capabilities. Overall, the presence of flagella and a multi-replicon genome may enhance the organism's survival and adaptability, allowing it to thrive in various ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caribensis
StrainMBA4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caribensis MBA4 chromosome 1, complete sequence.

Gene Summary

Adenine Count

659070 bp

Thymine Count

654735 bp

Guanine Count

1130994 bp

Cytosine Count

1130213 bp

Genome Length

3575012 bp

Protein-coding Genes

3126 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate kinaseK788_RS32595Not AvailablePositive505717 - 50630721570.1
(5-formylfuran-3-yl)methyl phosphate synthaseK788_RS32600Not AvailableNegative506339 - 50704624386.3
duf447 domain-containing proteinK788_RS32605Not AvailableNegative507058 - 50766021918.2
pyrroloquinoline quinone precursor peptide pqqaK788_RS44345Not AvailableNegative508691 - 5087652917.53
form i ribulose bisphosphate carboxylase large subunitK788_RS32610B2JX50Positive509172 - 51067755188.7
ribulose bisphosphate carboxylase small subunitK788_RS32615P23012Positive510721 - 51112215636.6
cbbx proteinK788_RS32620P23013Positive511173 - 51214435638.6
class 1 fructose-1,6-bisphosphataseK788_RS32625B2JX47Positive512154 - 51326340290.8
phosphoribulokinaseK788_RS32630Not AvailablePositive513292 - 51416432887.4
duf6513 domain-containing proteinK788_RS32635Not AvailableNegative515183 - 51657150844.9

Displaying genes 6601 – 6610 of 8402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

239 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da

Displaying 1–10 of 239 metabolites

Health Effects

No health effects information available for this bacterium.