Stappia sp. 22II-S9-Z10

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. 22II-S9-Z10 is characterized as a Gram-negative, rod-shaped bacterium. This classification indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a common feature among Gram-negative bacteria. The organism has a single replicon, suggesting a streamlined genomic structure which may influence its replication and overall genetic stability. The taxonomic details of Stappia sp. 22II-S9-Z10 are recorded under the accession number AQRB00000000.1, which provides a reference point for researchers seeking genomic information related to this strain. This accession allows for potential insights into its genetic makeup and functional capabilities. In terms of ecological significance, members of the Stappia genus are often associated with a variety of environments, particularly those that are rich in organic matter. The rod shape and Gram-negative nature suggest that Stappia sp. 22II-S9-Z10 may play a role in nutrient cycling and organic matter degradation within its ecosystem. Understanding the specific functions and interactions of this bacterium could provide valuable insights into microbial dynamics and ecosystem health, highlighting the importance of diverse microbial communities in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp. 22II-S9-Z10
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia sp. 22II-S9-Z10 contig37, whole genome shotgun sequence.

Gene Summary

Adenine Count

842161 bp

Thymine Count

843351 bp

Guanine Count

1819049 bp

Cytosine Count

1838858 bp

Genome Length

5343419 bp

Protein-coding Genes

4575 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrataseATO13_02695Not AvailableNegative638323 - 63908426258.5
aldehyde dehydrogenase family proteinATO13_02700Not AvailableNegative639089 - 64052850880.8
aldose 1-epimeraseATO13_02705Not AvailableNegative640683 - 64164834442.5
lysine exporter proteinATO13_02710Not AvailableNegative641653 - 64231522885.3
putative udp-glucose 4-epimeraseATO13_02715Not AvailableNegative642425 - 64326130087.6
transglycosylase-associated proteinATO13_02720Not AvailablePositive643370 - 6436278546.94
microcin b17 transporterATO13_02725Not AvailablePositive643835 - 64505846229.2
glutathione-dependent formaldehyde-activating enzymeATO13_02730Not AvailableNegative645299 - 64587420095.0
pyrroloquinoline quinone biosynthesis protein pqqeATO13_02735Not AvailableNegative646148 - 64730241291.2
coenzyme pqq synthesis protein dATO13_02740Not AvailableNegative647280 - 64756710497.8

Displaying genes 821 – 830 of 4801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.