Stappia sp. 22II-S9-Z10

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. 22II-S9-Z10 is characterized as a Gram-negative, rod-shaped bacterium. This classification indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a common feature among Gram-negative bacteria. The organism has a single replicon, suggesting a streamlined genomic structure which may influence its replication and overall genetic stability. The taxonomic details of Stappia sp. 22II-S9-Z10 are recorded under the accession number AQRB00000000.1, which provides a reference point for researchers seeking genomic information related to this strain. This accession allows for potential insights into its genetic makeup and functional capabilities. In terms of ecological significance, members of the Stappia genus are often associated with a variety of environments, particularly those that are rich in organic matter. The rod shape and Gram-negative nature suggest that Stappia sp. 22II-S9-Z10 may play a role in nutrient cycling and organic matter degradation within its ecosystem. Understanding the specific functions and interactions of this bacterium could provide valuable insights into microbial dynamics and ecosystem health, highlighting the importance of diverse microbial communities in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp. 22II-S9-Z10
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia sp. 22II-S9-Z10 contig37, whole genome shotgun sequence.

Gene Summary

Adenine Count

842161 bp

Thymine Count

843351 bp

Guanine Count

1819049 bp

Cytosine Count

1838858 bp

Genome Length

5343419 bp

Protein-coding Genes

4575 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrophobe/amphiphile efflux-1 (hae1) family proteinATO13_02345Not AvailableNegative548409 - 551558111436.0
dna polymerase iii subunit alphaATO13_02350Not AvailableNegative551735 - 555172125646.0
lipoprotein releasing system atp-binding proteinATO13_02355Not AvailableNegative555402 - 55610024519.2
lipoprotein-releasing system transmembrane protein lolcATO13_02360Not AvailableNegative556100 - 55734744361.4
prolyl-trna ligaseATO13_02365Not AvailableNegative557344 - 55868149539.3
na-ca exchanger/integrin-beta4ATO13_02370Not AvailablePositive558869 - 55977430831.8
short chain dehydrogenaseATO13_02375Not AvailableNegative559824 - 56060027130.3
sugar abc transporter substrate-binding proteinATO13_02380Not AvailableNegative560768 - 56171532544.3
spermidine/putrescine abc transporter atpaseATO13_02385Not AvailableNegative561856 - 56304642649.1
putrescine-binding periplasmic proteinATO13_02390Not AvailableNegative563063 - 56415740542.0

Displaying genes 751 – 760 of 4801 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.