Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia sp. 22II-S9-Z10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
842161 bp
Thymine Count
843351 bp
Guanine Count
1819049 bp
Cytosine Count
1838858 bp
Genome Length
5343419 bp
Protein-coding Genes
4575 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 192 - 306 | Not Available |
| hypothetical protein | ATO13_00005 | Not Available | Negative | 194 - 2356 | 74501.8 |
| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil dna glycosylase | ATO13_00010 | Not Available | Negative | 2458 - 3327 | 31369.2 |
| ubiquinone/menaquinone biosynthesis methyltransferase | ATO13_00015 | Not Available | Positive | 3423 - 4175 | 28009.9 |
| ubiquinone biosynthesis protein | ATO13_00020 | Not Available | Positive | 4175 - 5749 | 58461.7 |
| methylmalonate-semialdehyde dehydrogenase | ATO13_00025 | Not Available | Negative | 6129 - 7628 | 52862.3 |
| lysr family transcriptional regulator | ATO13_00030 | Not Available | Positive | 7733 - 8620 | 31905.6 |
| family 3 extracellular solute-binding protein | ATO13_00035 | Not Available | Negative | 8636 - 9343 | 23772.6 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | ATO13_00040 | Not Available | Negative | 9340 - 10104 | 26786.2 |
| shikimate dehydrogenase | ATO13_00045 | Not Available | Negative | 10117 - 10959 | 29394.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
