Aquimarina atlantica str. 22II-S11-z7

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina atlantica str. 22II-S11-z7 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in diverse environments. The genomic information for this strain is available under the accession number AQRA00000000.1, which provides a resource for further genomic studies and phylogenetic analyses. The classification of A. atlantica as a member of the Aquimarina genus suggests it may inhabit marine environments, where many species within this genus are typically found. The Gram-negative nature of this bacterium implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interaction with other organisms and its environmental resilience. Understanding the traits of Aquimarina atlantica str. 22II-S11-z7 can offer insights into its ecological roles, particularly in nutrient cycling in marine ecosystems. The singular replicon may enhance its efficiency in resource utilization, potentially allowing it to thrive in specific niches within its habitat. Further research into this strain could illuminate its contributions to microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina atlantica
Strain22II-S11-z7

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina atlantica strain 22II-S11-z7 contig39, whole genome

Gene Summary

Adenine Count

1910551 bp

Thymine Count

1901045 bp

Guanine Count

962785 bp

Cytosine Count

913614 bp

Genome Length

5687995 bp

Protein-coding Genes

4786 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazoleglycerol-phosphate dehydrataseATO12_01480Not AvailablePositive332226 - 33336243155.6
imidazole glycerol phosphate synthaseATO12_01485Not AvailablePositive333429 - 33401021578.0
30s ribosomal protein s23ATO12_01490Not AvailablePositive334047 - 33440313484.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseATO12_01495Not AvailablePositive334441 - 33516926876.3
imidazole glycerol phosphate synthaseATO12_01505Not AvailablePositive335311 - 33606627127.7
phosphoribosyl-atp pyrophosphataseATO12_01510Not AvailablePositive336144 - 33674022397.6
hypothetical proteinATO12_01515Not AvailablePositive337021 - 33968197554.5
hypothetical proteinATO12_01520Not AvailablePositive339686 - 34060333982.4
membrane proteinATO12_01525Not AvailablePositive340604 - 34269180764.5
30s ribosomal protein s1ATO12_01530Not AvailablePositive342866 - 34468667702.4

Displaying genes 291 – 300 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.