Oceanicola sp. 22II-s10i

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Oceanicola

Description

Oceanicola sp. 22II-s10i is a bacterial strain characterized by having a single replicon. This trait indicates a relatively simple chromosomal organization, which is typical for many marine bacteria. The strain is cataloged under the accession number AQQU00000000.1, which provides a reference point for genetic and genomic studies related to this organism. The reduced number of replicons may suggest that Oceanicola sp. 22II-s10i has an efficient replication mechanism or may reflect its adaptation to specific environmental niches in marine ecosystems. Marine bacteria, such as those in the Oceanicola genus, are known to play significant roles in biogeochemical cycles, including the degradation of organic matter and nutrient cycling in oceanic environments. Understanding the genetic makeup and replicon structure of Oceanicola sp. 22II-s10i could provide insights into its ecological functions, particularly in nutrient utilization and interactions with other marine microorganisms. This could be crucial for comprehending the role of such bacteria in maintaining ocean health and contributing to the overall balance of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOceanicola
SpeciesOceanicola sp. 22II-s10i
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanicola sp. 22II-s10i contig39, whole genome shotgun sequence.

Gene Summary

Adenine Count

862060 bp

Thymine Count

859664 bp

Guanine Count

1700461 bp

Cytosine Count

1692374 bp

Genome Length

5114559 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinATO6_24120Not AvailableNegative5024127 - 50243187398.69
type ii secretion system protein eATO6_24125Not AvailableNegative5024315 - 502530436530.0
conjugal transfer proteinATO6_24130Not AvailableNegative5025306 - 502668249233.8
conjugal transfer protein trbgATO6_24135Not AvailableNegative5026679 - 502734724382.4
hypothetical proteinATO6_24140Not AvailableNegative5027471 - 502813024474.1
conjugal transfer protein trafATO6_24145Not AvailableNegative5028138 - 502895329411.8
lytic transglycosylaseATO6_24150Not AvailableNegative5028965 - 503008039506.9
type iv secretion system protein b4ATO6_24155Not AvailableNegative5030273 - 503264888441.4
type iv secretion protein virb3ATO6_24160Not AvailableNegative5032638 - 503291610423.1
virb2 type iv secretionATO6_24165Not AvailableNegative5032929 - 50332199816.41

Displaying genes 4441 – 4450 of 4520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.