Oceanicola sp. 22II-s10i

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Oceanicola

Description

Oceanicola sp. 22II-s10i is a bacterial strain characterized by having a single replicon. This trait indicates a relatively simple chromosomal organization, which is typical for many marine bacteria. The strain is cataloged under the accession number AQQU00000000.1, which provides a reference point for genetic and genomic studies related to this organism. The reduced number of replicons may suggest that Oceanicola sp. 22II-s10i has an efficient replication mechanism or may reflect its adaptation to specific environmental niches in marine ecosystems. Marine bacteria, such as those in the Oceanicola genus, are known to play significant roles in biogeochemical cycles, including the degradation of organic matter and nutrient cycling in oceanic environments. Understanding the genetic makeup and replicon structure of Oceanicola sp. 22II-s10i could provide insights into its ecological functions, particularly in nutrient utilization and interactions with other marine microorganisms. This could be crucial for comprehending the role of such bacteria in maintaining ocean health and contributing to the overall balance of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOceanicola
SpeciesOceanicola sp. 22II-s10i
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanicola sp. 22II-s10i contig39, whole genome shotgun sequence.

Gene Summary

Adenine Count

862060 bp

Thymine Count

859664 bp

Guanine Count

1700461 bp

Cytosine Count

1692374 bp

Genome Length

5114559 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dehydrataseATO6_22820Not AvailableNegative4742021 - 474252718401.9
carnitine dehydrataseATO6_22825Not AvailablePositive4742641 - 474375039951.1
transposaseATO6_22830Not AvailablePositive4744162 - 474457214610.7
transposaseATO6_22835Not AvailablePositive4744566 - 474491913255.2
transposaseATO6_22840Not AvailablePositive4744974 - 474652456959.0
2-hydroxy-6-oxo-2,4-heptadienoate hydrolaseATO6_22845Not AvailableNegative4746562 - 474738330298.1
4-hyroxy-2-oxovalerate aldolaseATO6_22850Not AvailableNegative4747386 - 474842036417.0
acetaldehyde dehydrogenaseATO6_22855Not AvailableNegative4748417 - 474935232399.0
2-keto-4-pentenoate hydrataseATO6_22860Not AvailableNegative4749357 - 475014527004.5
hypothetical proteinATO6_22870Not AvailablePositive4751495 - 475198918011.8

Displaying genes 4211 – 4220 of 4520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.