Oceanicola sp. 22II-s10i

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Oceanicola

Description

Oceanicola sp. 22II-s10i is a bacterial strain characterized by having a single replicon. This trait indicates a relatively simple chromosomal organization, which is typical for many marine bacteria. The strain is cataloged under the accession number AQQU00000000.1, which provides a reference point for genetic and genomic studies related to this organism. The reduced number of replicons may suggest that Oceanicola sp. 22II-s10i has an efficient replication mechanism or may reflect its adaptation to specific environmental niches in marine ecosystems. Marine bacteria, such as those in the Oceanicola genus, are known to play significant roles in biogeochemical cycles, including the degradation of organic matter and nutrient cycling in oceanic environments. Understanding the genetic makeup and replicon structure of Oceanicola sp. 22II-s10i could provide insights into its ecological functions, particularly in nutrient utilization and interactions with other marine microorganisms. This could be crucial for comprehending the role of such bacteria in maintaining ocean health and contributing to the overall balance of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusOceanicola
SpeciesOceanicola sp. 22II-s10i
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanicola sp. 22II-s10i contig39, whole genome shotgun sequence.

Gene Summary

Adenine Count

862060 bp

Thymine Count

859664 bp

Guanine Count

1700461 bp

Cytosine Count

1692374 bp

Genome Length

5114559 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pentapeptide repeat-containing proteinATO6_18400Not AvailableNegative3781367 - 378188218160.6
hypothetical proteinATO6_18405Not AvailableNegative3781879 - 378251723369.7
hypothetical proteinATO6_18410Not AvailableNegative3782549 - 378317522597.7
cupinATO6_18415Not AvailablePositive3783262 - 378372616336.6
5-methyltetrahydrofolate--homocysteine methyltransferaseATO6_18420Not AvailableNegative3783808 - 378451225349.8
dna repair photolyaseATO6_18425Not AvailablePositive3784757 - 378583940374.7
aldehyde-activating proteinATO6_18430Not AvailablePositive3785896 - 378625212774.2
methionine synthase iATO6_18435Not AvailableNegative3786266 - 378727635588.2
aldolaseATO6_18445Not AvailableNegative3789417 - 378973111557.6
phosphoribosylaminoimidazole-succinocarboxamide synthaseATO6_18450Not AvailablePositive3789884 - 379064528604.5

Displaying genes 3411 – 3420 of 4520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.