Roseovarius sp. 22II1-1F6A

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius sp. 22II1-1F6A is a Gram-negative bacterium characterized by a single replicon. This organism is classified within the Roseovarius genus, which is known for its diverse ecological roles, particularly in marine environments. The genomic data for Roseovarius sp. 22II1-1F6A is available under the accession AQQQ00000000.1. The single replicon suggests a streamlined genomic organization that may be advantageous for adaptation to specific ecological niches. Gram-negative bacteria, including those in the Roseovarius genus, often possess unique structural features such as a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can influence their interactions with the environment and other organisms. These structural characteristics are relevant in understanding the ecological roles of Roseovarius sp. 22II1-1F6A, particularly in nutrient cycling and potential symbiotic relationships with marine life. Overall, the traits of Roseovarius sp. 22II1-1F6A highlight its potential significance in marine ecosystems and underscore the importance of further study to elucidate its specific functions and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius sp. 22II1-1F6A
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius sp. 22II1-1F6A contig46, whole genome shotgun

Gene Summary

Adenine Count

733904 bp

Thymine Count

725996 bp

Guanine Count

1327733 bp

Cytosine Count

1343789 bp

Genome Length

4131422 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinATO2_08135Not AvailableNegative1794075 - 179537343809.8
hypothetical proteinATO2_08140Not AvailableNegative1795370 - 179686651795.1
succinyl-diaminopimelate desuccinylaseATO2_08150Not AvailablePositive1797383 - 179853440173.6
lysr family transcriptional regulatorATO2_08155Not AvailableNegative1798621 - 179952333286.9
gntr family transcriptional regulatorATO2_08160Not AvailableNegative1799678 - 180037925969.0
tricarboxylate transporterATO2_08165Not AvailableNegative1800550 - 180207653359.2
hypothetical proteinATO2_08170Not AvailableNegative1802080 - 180252916284.5
abc transporter substrate-binding proteinATO2_08175Not AvailableNegative1802685 - 180365033912.1
2,5-dioxovalerate dehydrogenaseATO2_08180Not AvailableNegative1804223 - 180574352608.8
hypothetical proteinATO2_08185Not AvailableNegative1805745 - 180647026062.2

Displaying genes 1491 – 1500 of 3402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

19 records
Metabolite IDMetabolite nameStructureCAS number
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003208L-2-acetamido-6-oxoheptanedioateC9H11NO6Chemical structure of L-2-acetamido-6-oxoheptanedioateNot available
Average229.189Da
Monoisotopic229.059734238Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003696N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5Chemical structure of N-acetyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average231.229Da
Monoisotopic231.098645171Da
BASm00044082-oxo-dAMPC10H14N5O7PChemical structure of 2-oxo-dAMPNot available
Average347.2212Da
Monoisotopic347.0630843Da
BASm0007679isolithocholateC24H39O3Chemical structure of isolithocholateNot available
Average375.574Da
Monoisotopic375.2904687Da
BASm0007680isochenodeoxycholateC24H39O4Chemical structure of isochenodeoxycholateNot available
Average391.573Da
Monoisotopic391.2853833Da

Displaying 1–10 of 19 metabolites

Health Effects

No health effects information available for this bacterium.