Pseudoalteromonas agarivorans DSM 14585

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas agarivorans DSM 14585 is a rod-shaped bacterium characterized by its unique ecological niche and genetic composition. This species is notable for having two replicons, indicating a complex genomic structure that may contribute to its adaptability and metabolic capabilities. The strain is cataloged under the accessions NZ_CP011012.1 and NZ_CP011011.1, which provide insights into its genomic sequences and potential functionalities. These accessions serve as vital references for researchers interested in exploring the genetic makeup of Pseudoalteromonas agarivorans, facilitating studies on its biochemical properties and ecological roles. In terms of its ecological significance, Pseudoalteromonas agarivorans is known to inhabit marine environments, where it likely plays a role in the degradation of algal polysaccharides. This ability to utilize agar, a common polysaccharide found in marine algae, suggests that Pseudoalteromonas agarivorans may contribute to nutrient cycling in its ecosystem. By breaking down complex organic matter, this bacterium could help sustain marine food webs and influence the overall health of marine habitats. In summary, Pseudoalteromonas agarivorans DSM 14585 is a rod-shaped bacterium with a notable two-replicon genome structure and potential ecological importance in marine environments, particularly in the degradation of algal materials.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas agarivorans
StrainDSM 14585

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas agarivorans DSM 14585 chromosome I, complete

Gene Summary

Adenine Count

1096392 bp

Thymine Count

1089594 bp

Guanine Count

759274 bp

Cytosine Count

756680 bp

Genome Length

3701940 bp

Protein-coding Genes

3225 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m1 family metallopeptidasePAGA_RS13200Not AvailablePositive2912849 - 291535393892.5
is3 family transposasePAGA_RS13205Not AvailablePositive2915598 - 291681746705.2
helix-turn-helix domain-containing proteinPAGA_RS13210Not AvailableNegative2917031 - 291746816662.5
duf4258 domain-containing proteinPAGA_RS20880Not AvailableNegative2917478 - 291781912876.6
gtp-binding proteinPAGA_RS20980Not AvailableNegative2917841 - 29180146058.96
endonuclease/exonuclease/phosphatase family proteinPAGA_RS13220Not AvailableNegative2918265 - 291934441529.2
hypothetical proteinPAGA_RS13225Not AvailableNegative2919368 - 291973013753.6
tigr03643 family proteinPAGA_RS13230Not AvailableNegative2919807 - 29200559950.15
substrate-binding periplasmic proteinPAGA_RS13235Not AvailablePositive2920173 - 292086526539.0
yoak family proteinPAGA_RS13240Not AvailablePositive2920877 - 292153323101.2

Displaying genes 2631 – 2640 of 4115 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.