Roseovarius litorisediminis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius litorisediminis is a Gram-negative bacterium characterized by the presence of a single replicon. This species was identified in a coastal environment, highlighting its potential ecological significance in marine ecosystems. Its classification as Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for many marine bacteria and may contribute to its survival in diverse environmental conditions. The genome of Roseovarius litorisediminis is documented under the accession number FWFL00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for adaptation to specific niches within its habitat. The ecological role of Roseovarius litorisediminis may involve interactions within microbial communities, particularly in nutrient cycling and the degradation of organic matter in coastal sediments. Its Gram-negative nature and unique genomic characteristics could influence its interactions with other microorganisms and its response to environmental stressors, making it a subject of interest for studies on microbial ecology and marine microbiology. Understanding the specific traits and behaviors of Roseovarius litorisediminis can provide insights into the dynamics of coastal microbial communities and their contributions to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius litorisediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagicola litorisediminis strain CECT 8287 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
high-affinity branched-chain amino acid transport atp-binding protein livfPEL8287_03468Not AvailableNegative3493672 - 349436725145.6
l-cystine import atp-binding protein tcynPEL8287_03469Not AvailableNegative3494371 - 349511127211.0
leucine/isoleucine/valine transporter permease subunitPEL8287_03470Not AvailableNegative3495108 - 349634043916.1
high-affinity branched-chain amino acid transport system permease protein livhPEL8287_03471Not AvailableNegative3496345 - 349829769909.0
aliphatic amidase expression-regulating proteinPEL8287_03472Not AvailableNegative3498362 - 349964245714.0
urease accessory protein uredPEL8287_03473Not AvailablePositive3500002 - 350086230513.1
urease subunit gammaPEL8287_03474Not AvailablePositive3500864 - 350116611021.5
urease subunit beta 1PEL8287_03475Not AvailablePositive3501176 - 350148110958.0
urease subunit alpha 1PEL8287_03476Not AvailablePositive3501481 - 350324162200.3
urease accessory protein uree 1PEL8287_03477Not AvailablePositive3503251 - 350374218347.6

Displaying genes 3461 – 3470 of 3952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.