Roseovarius litorisediminis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius litorisediminis is a Gram-negative bacterium characterized by the presence of a single replicon. This species was identified in a coastal environment, highlighting its potential ecological significance in marine ecosystems. Its classification as Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for many marine bacteria and may contribute to its survival in diverse environmental conditions. The genome of Roseovarius litorisediminis is documented under the accession number FWFL00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. The presence of a single replicon may suggest a streamlined genomic organization, which can be advantageous for adaptation to specific niches within its habitat. The ecological role of Roseovarius litorisediminis may involve interactions within microbial communities, particularly in nutrient cycling and the degradation of organic matter in coastal sediments. Its Gram-negative nature and unique genomic characteristics could influence its interactions with other microorganisms and its response to environmental stressors, making it a subject of interest for studies on microbial ecology and marine microbiology. Understanding the specific traits and behaviors of Roseovarius litorisediminis can provide insights into the dynamics of coastal microbial communities and their contributions to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius litorisediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagicola litorisediminis strain CECT 8287 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldehyde dehydrogenase, thermostablePEL8287_01533Not AvailableNegative1577084 - 157853551401.1
hth-type transcriptional regulator cynrPEL8287_01534Not AvailableNegative1578626 - 157952232625.8
l-lysine 6-oxidasePEL8287_01535Not AvailablePositive1579748 - 1582693109246.0
putative fad-dependent oxidoreductase lodbPEL8287_01536Not AvailablePositive1582686 - 158378939543.7
hypothetical proteinPEL8287_01537Not AvailableNegative1583848 - 158488836396.7
phage tail collar domain proteinPEL8287_01538Not AvailableNegative1584961 - 158559321762.6
tpr repeat-containing protein yrrbPEL8287_01539Not AvailablePositive1585873 - 158770568128.5
formyl-coenzyme a transferasePEL8287_01540Not AvailablePositive1587746 - 158887639985.9
acyl-coa dehydrogenasePEL8287_01541Not AvailablePositive1588890 - 159004742525.7
d-galactonate dehydratasePEL8287_01542Not AvailableNegative1590061 - 159129344133.8

Displaying genes 1551 – 1560 of 3952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.