Marinobacter excellens HL-55

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter excellens HL-55 is a marine bacterium distinguished by the presence of flagella, which suggests potential motility in aquatic environments. This characteristic may enhance its ability to navigate through its habitat, facilitating interactions with other microorganisms and nutrients. The genomic organization of Marinobacter excellens HL-55 is characterized by a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability and efficiency in resource utilization. The genomic data for this organism is cataloged under the accession number LJZQ00000000.1, which provides a reference point for further studies and comparative analyses with other marine bacteria. In the context of its ecological role, Marinobacter excellens HL-55 is part of the Marinobacter genus, known for its involvement in biogeochemical cycles, particularly in marine ecosystems. The presence of flagella in this species may play a critical role in its ability to thrive in diverse marine environments, potentially influencing nutrient cycling and organic matter degradation. This adaptability to its ecological niche highlights the significance of motility in microbial life, particularly in the complex and dynamic environments of the ocean.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter excellens
StrainHL-55

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Marinobacter excellens HL-55 ITZ_scaf_3674, whole genome

Gene Summary

Adenine Count

825524 bp

Thymine Count

827342 bp

Guanine Count

1070162 bp

Cytosine Count

1059538 bp

Genome Length

3782657 bp

Protein-coding Genes

3499 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxymethylbilane synthaseHLUCCX14_09260A1TXW9Negative1962370 - 196331434536.7
two-component system, lytt family, response regulator algrHLUCCX14_09265P26275Negative1963400 - 196415528335.0
two-component system, lytt family, sensor histidine kinase algzHLUCCX14_09270P0AA94Negative1964166 - 196527841643.1
argininosuccinate lyaseHLUCCX14_09275Q1QSV4Positive1965338 - 196675352416.5
putative alpha/beta hydrolase domain (duf2235)HLUCCX14_09280Not AvailablePositive1966897 - 196899677744.8
protein of unknown function (duf2931)HLUCCX14_09285Not AvailablePositive1968996 - 196959822403.9
pas domain s-box/diguanylate cyclase (ggdef) domainHLUCCX14_09290Q8EJM6Negative1969617 - 197206191263.9
adenylate cyclase, class 1HLUCCX14_09295P0A1A8Positive1972201 - 1975050107675.0
diaminopimelate decarboxylaseHLUCCX14_09300Q9KVL7Positive1975365 - 197661545535.3
diaminopimelate epimeraseHLUCCX14_09305Q2SQ64Positive1976612 - 197754433843.1

Displaying genes 1841 – 1850 of 3546 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

240 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 240 metabolites

Health Effects

No health effects information available for this bacterium.