Xanthomonas axonopodis Xac29-1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas axonopodis Xac29-1 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species is notable for having four replicons, indicating a complex genomic structure that may play a role in its adaptability and survival in various environments. The organism is cataloged under several accessions in genomic databases, specifically NC_020797.1, NC_020801.1, NC_020798.1, and NC_020800.1. These accessions provide valuable resources for researchers interested in studying its genetics, physiology, and pathogenicity. In the context of its ecological role, Xanthomonas axonopodis species, including Xac29-1, are known plant pathogens that can cause significant agricultural damage. Their rod shape and flagella enable effective colonization and movement within plant tissues, facilitating infection processes. Understanding the traits of Xac29-1, such as its motility and genomic complexity, can offer insights into its interactions with host plants and the mechanisms underlying its pathogenicity. This information is crucial for developing strategies to manage diseases caused by Xanthomonas species in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas axonopodis
StrainXac29-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas axonopodis Xac29-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas axonopodis Xac29-1


Gene Summary

Adenine Count

12033 bp

Thymine Count

12619 bp

Guanine Count

19894 bp

Cytosine Count

19572 bp

Genome Length

64118 bp

Protein-coding Genes

67 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system effector avirulence protein avrbs3XAC29_RS45095Not AvailablePositive54192 - 58295143931.0
is3 family transposaseXAC29_RS47670Not AvailableNegative58409 - 585405219.33
yeca family proteinXAC29_RS45100Not AvailableNegative58585 - 5928325945.9
tn3-like element isxc4 family transposaseXAC29_RS45105Not AvailableNegative59302 - 62277111391.0
putative toxin-antitoxin system toxin component, pin familyXAC29_RS45110Not AvailableNegative62282 - 6270115338.9
ribbon-helix-helix domain-containing proteinXAC29_RS45115Not AvailableNegative62701 - 629408809.37
recombinase family proteinXAC29_RS45120Not AvailablePositive63154 - 6407734152.7
yeca family proteinXAC29_RS45395Not AvailableNegative45 - 74325919.9
tn3-like element isxc4 family transposaseXAC29_RS45400Not AvailableNegative762 - 3737111391.0
putative toxin-antitoxin system toxin component, pin familyXAC29_RS45405Not AvailableNegative3742 - 416115338.9

Displaying genes 61 – 70 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.