Xanthomonas axonopodis Xac29-1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas axonopodis Xac29-1 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species is notable for having four replicons, indicating a complex genomic structure that may play a role in its adaptability and survival in various environments. The organism is cataloged under several accessions in genomic databases, specifically NC_020797.1, NC_020801.1, NC_020798.1, and NC_020800.1. These accessions provide valuable resources for researchers interested in studying its genetics, physiology, and pathogenicity. In the context of its ecological role, Xanthomonas axonopodis species, including Xac29-1, are known plant pathogens that can cause significant agricultural damage. Their rod shape and flagella enable effective colonization and movement within plant tissues, facilitating infection processes. Understanding the traits of Xac29-1, such as its motility and genomic complexity, can offer insights into its interactions with host plants and the mechanisms underlying its pathogenicity. This information is crucial for developing strategies to manage diseases caused by Xanthomonas species in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas axonopodis
StrainXac29-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas axonopodis Xac29-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas axonopodis Xac29-1 plasmid pXAC64, complete sequence.

Gene Summary

Adenine Count

12033 bp

Thymine Count

12619 bp

Guanine Count

19894 bp

Cytosine Count

19572 bp

Genome Length

64118 bp

Protein-coding Genes

67 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gaf domain-containing proteinXAC29_RS44360Not AvailablePositive5039562 - 504080645359.4
glucan biosynthesis proteinXAC29_RS44365Not AvailableNegative5040973 - 504257459863.9
duf4380 domain-containing proteinXAC29_RS44370Not AvailableNegative5042643 - 504375840374.2
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseXAC29_RS44375Not AvailableNegative5044302 - 504511729829.1
5s ribosomal rnaNot AvailableNot AvailablePositive5045351 - 5045465Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive5045591 - 5048471Not Available
Trna-ileNot AvailableNot AvailablePositive5048699 - 5048775Not Available
Trna-alaNot AvailableNot AvailablePositive5048794 - 5048869Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive5048965 - 5050511Not Available
benzoate/h(+) symporter bene family transporterXAC29_RS44405Not AvailablePositive5051261 - 505244240207.2

Displaying genes 4531 – 4540 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.